Protein

View in Explore
Genbank accession
QOI66463.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MADLKVGTTIGGALVWNQGNFPLFPAGNSLLYRDFTVYSTNDKPKADDNDFVSKANGGTYSGTITLKNINSSTQMMQLQGTAAGMQFNIANADGTLTNNKYQIYAQGDLLRFRGPNPDGSGGLIDIFQWNNSSTSRQFEIRGDVRLIASGRYLDAAGNQVYSPLNKPTSADTGSLPLTGGALTGDLTSNSLIKTTSQIVGGDQSTFTNNLVVKGINAGAGQTFSFKDYQGNENVSLYTSNTDGFLNIRTKGKRIVTDSLRFKMDLNGGWEQSVIGGTSYNDQWQTISPIQINHGEVTGDSNYYPIVRGTSISKGKGWGTRVELGMLREGAGDWGKGNLIVGTTESASGADKKYSIYTFDINGNFSSTNTVSSPSIIGNYLRAKNAVDIFPESDPTFESGKFYNTPEYKTGWNSRGAVSGGTSRGYVSFYGQEETGTEFRAAISVIGYSNKNLTWRFNETGTFVSPGTIVSNAQDALRMVDLATNRSVIQRFDGNAYYLLFSDSSTGTWNSLRPIEITRSSGAITMRHGLTIEGGLAISSGEIFYPNATGRLAPDGNVYGSRYGGWIADWIQNNAINVAVDARDNRVSSCRRGERQQAYQGEAYTWECPWGYLTGSASTVGDGNIRFTTWYYRHPMFYVPSRGWVNFDNG
Physico‐chemical
properties
protein length:649 AA
molecular weight: 70572,98250 Da
isoelectric point:6,86589
aromaticity:0,11402
hydropathy:-0,45501

Domains

Domains [InterPro]
DC_0466
STR
1–300
DC_0466 IPR048390 DC_0990
QOI66463.1
1 649
Architecture
STR
ATT
RBD
STR 1-300 | ATT 457-516 | RBD 575-649
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI66463.1
1 649
Domain Start End Length (AA) Confidence
N-terminal 1 342 342 0,1426
Central domain 343 553 212 0,4001
C-terminal 554 649 95 0,8945
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-342
Central
343-553
C-terminal
554-649

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage FBB1
[NCBI] 		2776772 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia tracheiphila
[NCBI] 		65700 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66463.1 [NCBI]
Genbank nucleotide accession
MT920315.1 [NCBI]
CDS location
range 53824 -> 55773
strand +
CDS
ATGGCAGACTTAAAAGTCGGTACTACAATAGGTGGTGCATTGGTATGGAATCAGGGCAACTTCCCATTGTTTCCAGCCGGCAACTCTTTGCTATACCGTGATTTCACAGTTTACAGCACTAATGATAAACCAAAAGCTGATGATAACGATTTCGTTTCTAAAGCAAATGGTGGTACTTATTCGGGTACAATTACGCTGAAAAATATTAACTCATCTACTCAAATGATGCAGTTACAAGGTACAGCAGCAGGTATGCAATTCAATATTGCAAATGCTGATGGTACTTTAACAAATAACAAATATCAAATCTATGCGCAGGGTGATTTGCTTAGATTTCGAGGCCCCAACCCAGATGGTAGTGGTGGACTAATCGATATTTTCCAATGGAACAATTCGTCAACTTCTAGACAATTTGAAATACGTGGAGATGTGCGTTTAATTGCCTCTGGTCGTTACCTGGATGCCGCAGGAAATCAAGTTTATAGTCCTTTAAATAAACCTACATCCGCAGACACGGGTTCATTACCGTTAACCGGGGGAGCCCTGACTGGAGATCTTACTTCTAACAGTCTTATAAAAACAACATCGCAAATTGTAGGTGGAGATCAGTCAACCTTTACAAATAATCTAGTTGTTAAAGGTATTAATGCTGGCGCAGGACAGACATTTTCTTTCAAAGATTATCAAGGAAATGAAAATGTTTCTCTTTATACCAGCAACACGGATGGATTTTTAAATATTCGTACAAAGGGTAAAAGAATTGTCACTGATTCCCTTAGATTCAAAATGGATTTAAATGGTGGTTGGGAACAATCTGTTATAGGAGGAACTTCCTATAATGACCAATGGCAGACTATTTCTCCTATTCAAATTAACCATGGAGAAGTAACAGGCGATTCAAACTATTACCCTATAGTCAGAGGAACTTCTATATCCAAAGGTAAAGGTTGGGGAACTAGAGTAGAGCTTGGCATGCTTCGCGAAGGAGCAGGAGATTGGGGAAAAGGTAATCTAATTGTAGGAACTACCGAGAGTGCTAGTGGAGCAGATAAAAAATATTCCATATATACCTTTGATATAAATGGAAACTTTTCTTCGACTAACACTGTTTCTTCTCCTAGTATTATAGGTAATTATCTAAGAGCTAAAAACGCTGTTGATATATTCCCTGAATCTGACCCTACATTTGAGTCTGGAAAATTTTATAACACTCCTGAATATAAAACTGGGTGGAATTCAAGAGGAGCTGTGTCTGGTGGTACTTCAAGAGGTTATGTATCTTTTTATGGACAAGAAGAAACGGGAACTGAGTTCAGAGCTGCAATCTCAGTTATTGGATATTCTAATAAAAATCTAACCTGGAGATTTAATGAAACAGGGACATTCGTTTCTCCTGGAACTATAGTTTCTAATGCCCAAGATGCATTAAGAATGGTTGATCTAGCCACTAATAGATCAGTTATTCAAAGATTTGATGGAAATGCATATTATCTATTATTTTCTGATTCTAGTACTGGCACATGGAATTCGCTAAGACCTATAGAAATAACGAGGTCTTCAGGCGCAATTACTATGAGACATGGTCTTACTATAGAGGGCGGTTTAGCTATATCATCTGGTGAGATATTTTATCCCAATGCCACGGGAAGATTAGCTCCAGATGGAAATGTCTATGGTTCTAGATATGGCGGTTGGATAGCTGATTGGATTCAGAATAATGCAATAAATGTGGCTGTTGATGCTAGGGACAATAGAGTATCATCATGTCGTCGTGGAGAACGCCAGCAAGCATATCAAGGAGAAGCCTATACATGGGAATGCCCGTGGGGGTATTTAACCGGTTCAGCTAGTACCGTGGGTGATGGTAATATCAGATTTACAACATGGTATTATAGACACCCTATGTTTTATGTACCCTCGCGCGGCTGGGTAAACTTTGATAATGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcd1e1580a2cc367bc758fe2d223bad85f567166c51685cd5918363ccc79357a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6235
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Erwinia tracheiphila lytic bacteriophage FBB1 isolated from the disease transmitter spotted cucumber beetle Fu,B. and Beattie,G.A. 2021-12 — GenBank