Protein

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Genbank accession
XFC46763.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAGFEGAYSTILQGVSQQLPKLRLVGQVTAQDNMISDIVTNVRRRPGIAIRSNIRMPGENHLTIRAWETDIAGQRVNVFVGTATGRLVVMNIDFTIALVDIPAPYLKATKAQDIRGTTVGDDFYFLNVTRQPAYGPPAETQANPDNLGFFYIRAGTFSKEYKVTLTNSAGTIDLTYTTPNATETDAAKHSTPEWIATQLLASNPTGLATLGLVSANVGAFAALSSQSVSRGQLSVVSASGTAYIQPSNVSKVRTEADLPQMLPPGWDGYVMSVGEQRLLKYYRYNNAKKEWLECGVWGSPASIQGMPTRLTYTTGWVYGEVDYEGRLAGDDDTNPTPIFATTRKPSGLSAFQGRLVILCGSMVYMSASNNPRRFYRSTVTSLIDSDTIAVGSSANSSAEYQYAVQFQKDLLLFSQKYQALVPSSGKAITPRDATVLLTSSYSVDTLSEPVPIGRTLLFSAPRSANYFGFMEMVSSQYSDAQYVANDATAHLPKYMGGQCRFGVSSSVASMVLFAPSGDPNSLIVYEYSWDGDTKVQQAWHTWRFAYPIATAYFANETINITFIKNGVLVICTVDPRQGILNPSGTRRPFLDLHDELDVVDGQCFVPQWMTEFDPDIMKNISLTVASGPMAGEPVGVTKFTGNTLTTVRSFQSGRVSFGLRYRSLLSPTPPIMQDRNGIKIESAKLTVLRFGVSTQNSSEYDVLVSDSTSEDLQALDQATLRYCSTELVPGRAQWSTASRAIIPARTDADTTTLALFTDGTGELNFTGIDYTGRFNQRIRRR
Physico‐chemical
properties
protein length:781 AA
molecular weight: 85372,27310 Da
isoelectric point:6,30796
aromaticity:0,09731
hydropathy:-0,17157

Domains

Domains [InterPro]
IPR058003
TTP
1–780
IPR058003
DC_0058
STR
1–781
DC_0058
XFC46763.1
1 781
Architecture
STR
STR 1-781
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC46763.1
1 781
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9899
Central domain 142 340 200 0,1007
C-terminal 341 781 440 0,1890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-781

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage MKPT02
[NCBI] 		3236643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas tolaasii
[NCBI] 		29442 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC46763.1 [NCBI]
Genbank nucleotide accession
PQ015601 [NCBI]
CDS location
range 39507 -> 41852
strand -
CDS
ATGGCTGGATTCGAAGGTGCGTATAGCACCATCCTGCAAGGCGTGTCACAGCAGCTGCCCAAGCTCCGGCTGGTAGGCCAAGTGACTGCGCAAGACAACATGATCAGCGACATCGTGACGAACGTTCGGCGTAGGCCGGGAATCGCCATCCGCTCCAACATCAGGATGCCGGGTGAGAACCACCTGACCATCCGGGCTTGGGAGACGGACATCGCCGGTCAGCGTGTGAACGTGTTCGTGGGCACCGCCACCGGGCGACTGGTGGTGATGAACATCGACTTCACCATCGCACTGGTGGACATCCCCGCGCCGTACCTGAAAGCCACCAAGGCTCAGGACATCCGCGGCACCACAGTAGGCGATGACTTCTACTTCCTGAACGTGACCCGGCAGCCAGCCTACGGGCCACCAGCGGAGACGCAGGCGAATCCGGACAACCTTGGGTTCTTCTACATCCGAGCCGGTACGTTCTCGAAGGAATACAAGGTCACCCTCACGAACTCCGCGGGGACCATCGACCTGACGTACACAACGCCTAACGCCACCGAGACAGACGCCGCCAAGCACTCCACTCCTGAGTGGATCGCCACGCAGCTCCTCGCCTCGAACCCGACAGGGCTAGCCACGTTGGGTCTGGTATCGGCGAACGTCGGTGCCTTCGCTGCCCTAAGCAGCCAGTCCGTGTCCCGCGGTCAGTTGTCCGTGGTATCCGCCTCAGGCACCGCGTACATCCAGCCGTCGAACGTCTCGAAGGTTCGGACCGAGGCCGACCTCCCGCAGATGCTCCCGCCCGGTTGGGATGGGTACGTCATGTCGGTTGGCGAACAGCGCCTGCTGAAGTACTATCGGTACAACAACGCCAAGAAGGAATGGCTGGAGTGCGGCGTCTGGGGAAGCCCGGCAAGCATCCAAGGCATGCCGACTCGGCTGACCTACACCACCGGTTGGGTCTACGGCGAGGTGGACTACGAGGGGCGACTGGCCGGGGACGACGACACGAACCCGACTCCGATCTTCGCCACCACTCGCAAGCCGTCTGGCCTGTCTGCCTTCCAAGGGCGGCTGGTCATCCTGTGCGGCTCTATGGTGTACATGTCGGCCAGCAACAACCCGCGGCGCTTCTACCGAAGCACAGTGACTTCGCTCATCGACTCCGACACAATCGCTGTCGGCTCCTCAGCGAACTCCTCGGCGGAGTACCAGTACGCTGTGCAGTTCCAGAAGGACCTGCTGTTGTTCTCGCAGAAGTACCAAGCGCTTGTGCCCTCCAGCGGCAAGGCCATCACTCCCCGCGATGCTACGGTGTTGCTCACTTCGAGCTACAGCGTGGACACGTTGTCGGAGCCGGTGCCCATTGGCCGCACGTTGCTGTTCTCGGCCCCCCGGTCGGCGAACTACTTCGGGTTCATGGAAATGGTCTCCAGCCAGTACTCGGACGCTCAGTACGTGGCGAACGATGCTACAGCTCACCTGCCAAAGTACATGGGCGGGCAGTGCCGATTCGGCGTGTCCTCCTCTGTCGCAAGCATGGTGCTGTTCGCTCCGAGCGGTGACCCGAACAGCCTGATCGTGTACGAGTATAGCTGGGACGGTGACACGAAGGTTCAACAGGCTTGGCACACTTGGCGATTCGCCTACCCCATTGCCACCGCGTACTTTGCGAACGAGACCATCAACATCACGTTCATCAAGAACGGGGTGCTGGTGATCTGCACCGTAGACCCGCGACAAGGCATCCTAAACCCGTCGGGTACTCGCAGGCCGTTCCTCGACCTGCACGATGAACTGGATGTGGTAGACGGCCAGTGCTTTGTTCCTCAGTGGATGACCGAGTTCGACCCGGACATCATGAAGAACATCAGCTTGACTGTAGCATCCGGGCCAATGGCTGGCGAGCCTGTAGGCGTAACGAAGTTCACAGGGAACACTCTAACCACTGTCCGTTCTTTCCAGAGCGGGCGAGTGAGCTTCGGCCTGCGGTATCGCTCGTTGCTGAGCCCTACGCCACCGATCATGCAGGACCGCAATGGCATCAAGATCGAGTCGGCGAAGCTCACCGTCCTCCGCTTCGGCGTCTCCACGCAGAACTCCAGCGAGTACGACGTGCTGGTCTCTGATAGCACCAGTGAGGACTTGCAAGCGCTGGATCAGGCGACACTGCGGTATTGCTCTACAGAGCTTGTCCCCGGGCGGGCGCAATGGAGCACCGCTTCCCGTGCGATTATCCCGGCACGGACTGACGCCGACACCACAACGCTTGCATTGTTCACAGACGGCACCGGAGAGCTTAACTTCACCGGCATCGACTACACAGGCAGGTTCAATCAACGAATCCGCAGGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5d1f5220db694a9c8355f75d736b6efc6302b8a0fc13816044f8291279d730d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50