Protein

View in Explore
Genbank accession
YP_010670582.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAIVNFPANPTIGDQYNENGITYTWNGAAWTANGAENTDARYVQVTGDTMTGDLTVPSLNSGPLAGFRNHLINSDFRVWQRGASFAGKTIGQYTADRWYAQTDTITGNNGDDFRRVTQEAGNVLPGLPFAFRVNGSSQCVIHQAVELSYGNSPFTNGTTWTLSWWEAGSAVDYAGIAFASDAQNNTPFNPVTGAAGTFDALAGAATVQTIGSWTRKASTFTVGADGPTINKPCLTLVIGDTASSSLYITGLQLEPGPVASPVEARPIQTELALCQRYAYRIESSSSTVYTRFGGGVANGTSSLTALVQFPVSMRSIPHSITSASSGNFQASNGVVGQIGTNLTLQTSTRSKTSSIIILAVGGGLTSGNYYFLEAANNANAWIVFDAEL
Physico‐chemical
properties
protein length:388 AA
molecular weight: 40889,68360 Da
isoelectric point:4,96076
aromaticity:0,10052
hydropathy:-0,09588

Domains

Domains [InterPro]
DC_0568
STR
5–388
DC_0568
NF048003
Unmapped
149–261
NF048003
YP_010670582.1
1 388
Architecture
STR
STR 5-388
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670582.1 [NCBI]
Genbank nucleotide accession
NC_070965.1 [NCBI]
CDS location
range 38274 -> 39440
strand -
CDS
ATGGCAATCGTAAATTTCCCAGCCAATCCAACCATTGGCGACCAGTATAACGAGAACGGTATTACATATACCTGGAACGGAGCGGCTTGGACTGCTAACGGTGCTGAGAACACCGATGCTCGTTATGTTCAGGTGACTGGCGACACGATGACGGGTGACCTCACGGTTCCCAGCCTGAACTCAGGACCACTTGCTGGGTTTCGCAACCATCTCATAAATTCAGATTTCCGTGTTTGGCAGCGTGGGGCAAGCTTTGCGGGTAAAACGATAGGCCAATACACAGCCGACCGTTGGTATGCACAGACCGACACCATTACGGGAAACAATGGTGATGACTTCAGAAGGGTCACTCAAGAAGCAGGCAACGTTTTACCAGGGCTCCCCTTTGCATTTCGCGTGAATGGCTCCTCGCAATGTGTCATTCATCAAGCTGTTGAGCTTTCGTATGGCAACTCGCCTTTTACCAATGGCACAACTTGGACGCTGAGTTGGTGGGAGGCAGGCTCTGCTGTCGATTATGCAGGCATTGCGTTCGCTAGTGATGCTCAGAACAATACCCCATTCAACCCAGTGACTGGTGCTGCTGGAACGTTTGATGCATTAGCGGGGGCTGCCACAGTGCAAACGATTGGCTCGTGGACTCGCAAGGCTTCTACTTTTACGGTTGGAGCTGACGGTCCAACAATCAATAAACCATGCCTGACGCTTGTTATTGGTGACACTGCATCCTCCAGTCTTTACATCACAGGGCTTCAGCTCGAACCGGGTCCTGTCGCCAGCCCCGTAGAGGCAAGACCCATCCAGACTGAGCTGGCTCTCTGCCAGAGATATGCGTATAGGATCGAATCGTCCAGCTCAACAGTCTATACAAGGTTTGGTGGTGGGGTAGCAAATGGAACAAGCTCGTTAACAGCACTTGTGCAGTTTCCAGTATCAATGCGCTCCATTCCCCATTCAATCACATCCGCTTCTTCGGGCAACTTCCAGGCTTCGAATGGAGTCGTCGGGCAAATTGGAACGAATCTGACATTACAAACTAGCACAAGGTCTAAGACTTCATCCATCATAATTCTTGCAGTAGGTGGAGGATTAACTAGCGGCAATTACTATTTCCTAGAGGCGGCGAATAACGCCAATGCTTGGATTGTTTTCGACGCCGAACTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b38634cda2f98e9e1061457f14c6ac0478658a4441a9ca38df060751296fa413
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7836
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank