Protein

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Genbank accession
QIW88519.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MTTLFSTCVDIAEKVIKQQTITAASLPILATLLDSTDTNITNTLFGISSLPLDASYWSVTTNILTNTLDINFGTALTNYALPLELRLTTSDGIIVALTTLSDTTIEAGNELILYADTGVTLTLDFGTVKLSNAILNLLFKGINTFPSALSAKYYNNSNTLQATIPLTAAKWSKRETGTLGEIFFEYGNTQTLPTTNSTVNLARITDDSNNIWFEADIAIPTTLKPSSVIYSNSLVLRVQDINVNLATYTTPNNPNSVLHLDFNGRLSDQSSNSKIASMSGIEYDSVNKLFGTECLVASAGTSISYEGVVFPNEFTFQCFCYFTTNPSGRLIALAEKNGVFSLRKTVGNSLEVSINGSVVITAPWVAPTGQWQHIWIQKSANQLKLRVNSADINVTTAYTATITTNSNLFSVANGILGLCNGVYLENGLSLFQSFVQPLPKRVNDWSDISFFTWLNLEFPQLKKFF
Physico‐chemical
properties
protein length:465 AA
molecular weight: 50733,84100 Da
isoelectric point:4,85441
aromaticity:0,09892
hydropathy:0,12667

Domains

Domains [InterPro]
IPR013320
STR
311–409
IPR013320
QIW88519.1
1 465
Architecture
STR
STR 311-409 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW88519.1
1 465
Domain Start End Length (AA) Confidence
N-terminal 1 333 333 0,6977
Central domain 334 454 122 0,0508
C-terminal 455 465 10 0,3112
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-333
Central
334-454
C-terminal
455-465

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88519.1 [NCBI]
Genbank nucleotide accession
MT234670.1 [NCBI]
CDS location
range 83884 -> 85281
strand +
CDS
ATGACTACCCTCTTCAGCACTTGCGTCGATATTGCAGAAAAAGTAATCAAGCAGCAAACCATCACGGCAGCTTCTTTACCGATTCTAGCGACATTACTGGACTCGACGGATACAAACATCACCAACACGCTATTTGGTATCTCCTCATTGCCTCTAGATGCAAGCTACTGGAGTGTAACAACTAATATACTGACCAACACCTTAGATATAAATTTCGGAACTGCCTTAACTAACTATGCGTTACCCCTCGAACTCCGCCTTACTACCTCTGACGGCATTATCGTTGCTCTTACTACACTTTCTGACACCACAATAGAAGCTGGAAACGAATTAATTCTTTATGCTGATACAGGTGTAACACTGACATTAGACTTCGGCACAGTAAAATTAAGCAACGCGATACTCAACTTACTATTCAAAGGAATCAACACATTCCCCAGCGCACTGAGCGCCAAATATTACAACAACAGCAATACGCTACAAGCCACAATCCCTTTAACAGCCGCCAAATGGTCAAAACGTGAAACTGGTACACTTGGCGAAATATTTTTCGAGTACGGTAACACGCAGACACTACCAACTACCAACAGTACAGTGAATTTGGCGCGAATTACTGATGACAGCAACAATATTTGGTTTGAGGCAGATATTGCGATTCCTACAACCCTGAAGCCAAGCTCAGTGATATATTCCAATAGCCTAGTTTTGCGTGTTCAGGACATAAATGTAAACCTTGCCACATATACAACACCAAACAACCCTAACAGCGTCCTACACCTTGATTTCAATGGTAGGCTTTCTGACCAAAGCAGCAATTCAAAAATAGCCTCAATGTCAGGTATCGAGTATGACTCAGTGAATAAGCTTTTTGGAACTGAGTGCTTAGTAGCTTCTGCGGGTACATCTATTTCTTATGAAGGAGTAGTATTCCCTAACGAGTTCACTTTTCAGTGTTTTTGTTATTTCACCACAAATCCTTCAGGACGGCTAATCGCCTTGGCAGAAAAGAATGGTGTGTTCAGCTTGCGTAAAACTGTAGGTAACAGCCTCGAAGTCAGCATAAATGGCTCTGTGGTCATAACTGCGCCTTGGGTCGCTCCTACGGGACAATGGCAGCATATTTGGATACAAAAAAGCGCTAATCAACTGAAACTCAGAGTGAATAGTGCTGATATAAATGTGACGACTGCTTATACTGCAACAATAACAACCAACAGTAATCTCTTTTCTGTAGCTAATGGGATTTTGGGGTTATGTAATGGTGTTTATCTAGAAAACGGGCTAAGCTTGTTCCAATCATTCGTACAACCTTTACCTAAACGTGTAAATGATTGGTCAGATATCTCTTTCTTTACTTGGCTGAATTTAGAGTTTCCTCAGTTGAAGAAATTCTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d15dfa9008633b7a1b46bc87463ca376a06d1096e763d90c42af12fce5aa6777
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7341
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank