Protein

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Genbank accession
AUR96749.1 [GenBank]
Protein name
head-closure protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKLHDSFPFFGGLDVNTPYLQRNPGSLINSLNYEPDPDGGYRRIRGYERYDGQPSPTDSGVTAIPVSAVITPAPTLGDVLTGSDSGATGNYLDQDADLLLVYVTNINGTYTSVDTVSGATVTGDSTNAIQLIDNADFVALRRSAREYNRTQIQEVPGTGPVHAVYEHDNVVYAIRNAADGLSANIYKDSGAGWQLVDLSNNFIVSFDNGTGGSDDPFAIGNVVTGATSGATGTVTAVGVQSSDRQGGYISLKSVTGTFQDDENLNVGSTMVATVNGAPQAVSLNPNGKYRIVSYNFFGGLDTFSMYITNGVQTALQFDGESVAPIFTGLDIADDTPNDVIVHYDHLFLAFDNGLLQHSVIGEPLNWRGEFGAFQFALGSNITNLIVSPRALVVTTSDNVQVIYGQGTDNWEKAFITEKGIGVIGSGQYLSVPLVLDRAGVLALDRVEAFGNFQDSIISENVRSIVNRLYTNVTGSMVDKLNNHYILFSSTGENLLTGFSRGSFIGYFPINFGRVVLFASSHEDRMFFTDTVGGYVYLMRKGTSFDGGDIESIFQSSYAFQGEPQRKKRYRRVTISLKSFLPTLALSFAFSFGKGDAQIRSSTFNSNTLGGGGRWDVDNWDEFFWDGQDVPEIISDIDGVGTDISTLLYSNSAEIDSYVIEDITIQYSPRSLKR
Physico‐chemical
properties
protein length:674 AA
molecular weight: 72956,81130 Da
isoelectric point:4,49673
aromaticity:0,10979
hydropathy:-0,13813

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR96749.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9585
Central domain 91 289 200 0,0558
C-terminal 290 674 384 0,0776
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-289
C-terminal
290-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.232.O._10N.261.51.E11
[NCBI] 		1881454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio tasmaniensis
[NCBI] 		212663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96749.1 [NCBI]
Genbank nucleotide accession
MG592596 [NCBI]
CDS location
range 10618 -> 12642
strand +
CDS
ATGACTAAATTACACGACTCGTTCCCATTCTTTGGTGGATTAGATGTAAATACGCCATATCTACAAAGAAACCCTGGTTCCTTAATTAACTCATTAAACTATGAGCCTGATCCCGATGGTGGCTACAGACGCATTAGAGGGTATGAACGTTATGATGGTCAGCCTTCACCAACTGACAGCGGTGTTACTGCTATCCCGGTAAGCGCAGTTATCACCCCTGCACCTACTCTTGGTGATGTTTTAACGGGGTCAGATTCCGGTGCAACGGGCAACTACCTAGATCAAGACGCCGATCTGTTGCTGGTTTACGTGACCAATATAAACGGAACCTACACCAGCGTCGACACGGTAAGCGGTGCAACGGTAACGGGCGACTCAACTAATGCAATTCAGTTAATCGATAATGCTGATTTTGTAGCGTTACGCCGATCGGCAAGGGAATATAATCGAACTCAAATACAAGAAGTACCGGGTACCGGGCCAGTACATGCAGTCTATGAGCATGACAATGTTGTGTATGCGATTCGAAATGCTGCTGACGGATTATCCGCAAACATTTACAAAGACTCCGGCGCTGGTTGGCAACTGGTTGATTTATCTAACAATTTCATTGTTTCATTCGATAATGGTACGGGTGGTAGTGATGATCCCTTTGCTATCGGTAATGTGGTTACTGGTGCAACTTCCGGCGCAACGGGTACCGTAACTGCCGTGGGCGTTCAGTCTTCTGATAGACAAGGCGGTTACATATCGCTTAAAAGCGTCACAGGAACGTTTCAGGACGATGAAAACCTAAACGTAGGCTCGACTATGGTTGCAACGGTTAACGGAGCACCTCAAGCCGTATCTCTGAATCCTAACGGTAAATACAGAATAGTCAGTTATAACTTCTTTGGTGGCTTAGACACCTTCAGCATGTATATAACCAACGGAGTACAAACGGCACTTCAATTTGATGGTGAGTCAGTCGCCCCAATCTTTACCGGATTAGACATTGCAGACGACACGCCTAATGATGTGATAGTCCACTACGATCATTTGTTCTTAGCCTTTGATAATGGATTACTACAGCACAGCGTGATCGGTGAGCCTTTAAACTGGCGCGGTGAGTTTGGAGCATTCCAATTTGCTTTAGGTTCCAACATTACAAACCTGATCGTATCTCCAAGGGCTTTAGTTGTAACCACCTCAGATAACGTTCAGGTTATTTACGGGCAAGGTACAGATAACTGGGAAAAAGCGTTTATTACTGAAAAAGGCATAGGCGTTATTGGTAGTGGTCAATACTTGTCGGTACCGCTTGTTTTGGATAGGGCTGGCGTTTTGGCCCTAGATCGAGTTGAAGCGTTTGGTAACTTCCAGGATTCAATCATTAGTGAGAATGTACGTTCGATAGTGAACAGGCTTTACACCAATGTAACCGGGTCGATGGTCGATAAGCTTAACAACCATTACATATTGTTTAGCTCAACGGGTGAGAACCTATTAACGGGATTCTCAAGGGGATCGTTTATTGGCTACTTCCCTATTAACTTTGGTCGAGTTGTACTGTTTGCTAGTTCCCATGAAGATCGAATGTTTTTCACTGACACGGTAGGCGGTTACGTTTACTTGATGAGAAAAGGGACGAGCTTTGATGGTGGTGATATAGAGTCGATCTTTCAAAGCTCTTACGCGTTCCAAGGTGAACCGCAGAGGAAAAAGAGATACAGACGGGTTACAATTAGTCTTAAATCATTCCTTCCAACACTGGCTTTAAGTTTTGCGTTTTCGTTTGGTAAAGGTGACGCCCAGATCCGAAGCTCTACGTTTAACAGCAATACTCTTGGTGGTGGCGGTCGATGGGATGTAGACAATTGGGACGAGTTCTTTTGGGATGGTCAAGACGTACCTGAAATTATTAGTGATATAGACGGCGTAGGCACTGACATTTCAACGTTGCTTTATTCAAATTCAGCCGAGATTGATAGTTATGTAATTGAAGATATAACGATCCAATACTCTCCTAGATCTCTAAAGAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
84984393ee231e9031cee8b8e25f433a8c6e9f1ff71baabf836e6da40211c86c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8480
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank