Protein

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Genbank accession
CAF34283.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPLTRLDNLYSSKTGKYLYVSPDDFNATDELDNRGNSPLRPFKTIQRAFIEVSRYSYLPGANNDRFDQFSIMLMPGNHYIDNRPGLVTETAVEGRYYDASNLLRANRQEVIDRAVAQVAVDHPDFYYPGDPQTGDWSRYKDSYRLIQKNRQEIIDTAYAEIAIQYPSFVNPDPDKCKRDIGHFIDAVSLDIHLAGGNVYTRKFILQYFDNNGSPISNGLVGEEVESITAFNKARDEMKRAITNQLTYQDLTLTPDPATQSNTNSNSCANVQTALDTLTSIVTTVISDGDLLNLPDETTSTLVPSGEVKCKRDAGFIVDGLIDDLATEGNANTISNAKAYFDRFGNPISNGLLGEEAESVTAFNAIAYWAKRAVTNVLYEKDLTLSEGPAYANANTAIITYDESGNIATCQDVQATIDTLISILTGVIIDGNLDNLASVTVTGVLPSFNYNRALEEWQDNSIVDLSNPDNVLYKFNAATGGAIVPRGCSLIGYDLRRTIVRPLYVPDPADTSQERTSIFNLTGGCYLWQFTIKDGDLSAQSPLYDASAGVGKVYFKKGSTELAIPENSHHKICIMTYADRSDLDNYYDKVGKAFQQFQPTIDDGGLEALVQENRIVGPLSDSRTIESIKIDDSTTFTGIANGTNVISGVSDTSNLEVGFEILSSDVSVSIPPNTRIEQITGSNITLSNAISGSGSKSFIASFGYTKVTVFTKIDHGYFEGQYVAIINSGLSDTINGTFKVTAIDGSNPKVFEYEVPITAAGLGLVSGQTYRSGEVGGVSTNAVVLAEIDSVESASPYVFNCSIRSTWGQCGMWADGSKATGFKSMVVAQYTGVSLQKDDRAFIRYDRLTNTWNQASLTDAFATIPYHTKGDAYWKDDWRNFHIRASDDSFIQCVSVFAVGFFDHFLMESGGDMSITNSNSNFGNTSLHSIGFKGFSFNQDKGGYVTDIIPPETINAGRTIINQWYTLDVDASNSRTNHTKIYLAGDSVDNPLDRPASTINGYRIGAKSGEQLFVNLDRYALEPSGPNEFSATLTPNGFKSWTVGIETLTPSTANVDNYAQDAANRIEDNKQFIQSEAYQYILQKYPYLEDRETINIAKCERDIGYFVDAVVNDLRLGGNINSIQAAEGYYIGGNLTYITGELNETIDALDYVKNIMIAAMRNFDYLIRDCVITPESAIVNVGDTSGLLVGMSVAEYEPSDFTNGKLNPNPTQIISNIPAGTIIKQIISDTQIELGIPGSKLDQGTSQPSTNLELIDSAYLYFTLDNGAWTFINPTSDDSLVQDSSVDAFGDPLPECQNIATTIEGYFEQIFLVLNTGYTILGGREADAYNAIIDNKRFIAAEAVYRVATNPSFAGTKLGQGLLASTGETIEDACVDDVENVLAAIAYNVKFGGNNKSYEAAELYLTGAHVQGEEAESVAVFNIARDLAIQAMRQETISVQGDHGLTQTIDTSIIPEYDTDGNLVSPPCADVASAITTLTAIVTSGILGSLAGVSKTLPTFQSVTRVEPNSNLEGLASRATLFTLNTGGFGGNPNPHDLETGTAVRLIPKARPGSNPDKRVIRLPTGFETNTKYYIIAPGRNLYPENFSISNQVITVTEASGTSFTTPNSTRETASGVYRSLVAQPKIDTDGTALAKGTGLRFNVIVNDDGTVALGNVGLNLDPIANGGSRYEVGDIVVISDGQIGGSGAPDLEIEITAVSAATYPGVFDGSETNKLMLATSPENAAAGIYMYSPETNSVDPDVEIELQSYVLDSNYDLHQYKCNVVGASEIESSVAHIFDVPAPNTTPQRVFVRIADDIQGSTLPQLSGSSSDISTQTLYFVRYVSNKRFTLHTTAADAESGDRALTFVTGSGKNFYVFANKRTSPLKFDPEFTSSINQSGLWYVNVVDESSAGSLNYNRYSILSRFHGGAEESNDYQTKTDPTLDTRYLRVEDNREKEDRVYRLRYVVPSYLETVRDPLNGFVIKTRTDDKRRLVPQRVLLKPIQGNPNTVASFYNPIGAREQIGLSKDELIQDQLRPIDPSVLDLLPEQQNLYDPYVSPNVIEFDSKIAASIQSARKVVLLGQTDEFLEVTLFDHTIVNEAVKNEIFTVVSCVNLQGGFFNPNATQSNGSNLITWETISGNNTSSGTAYLHAFITDTENAAYTLVLKDAQGELRYDPNSPVQFRQGIATLNLTAQPNSFGDPERKDKSLRENYLYRVEGSNVYTIAPGDTITDDTGSNTYYVAAIEDQGNFEDTFYIFDIDTLQQRIPNQQDGIYYLTCLRGNISPYPTGSGVGENFRNFKFSQPISQLYPLNYKNDPLWFQVDGSTGFRDTSILDVPATFSAADNYVHGLVTVNDAKGSETREMVNDMISNPILSYYVYTNSTTDSVGNLVDNRIQAQEGNATSGSEDRLIPISGDSAYPTERKLYVELRRPSIARSGNHTFEYLGFGPGNYSTGFPLRQEVVLTDKQDFYAQAKREDGGIVFYTGLNSNGDLYIGNKKVNAITGEETFLESAELLDSDDDDEDIGTLVTTFDSPVTFNSTIVVAGKSTFNGPLEINVEANEGDPIRVASNIAQGDDATLFRGSWRNVEDGDIVIGENRIRSAVFILNARPKPGGVYGQSYTFRTHYTAAEPSNIVPWQLDDGFYAAQKVEYGTGNNPEPGDILFKGSSVNLSGSLGWIYANAFASKESLINRIEANGQDLTVFWIPTVTNSSAGVTSISKIRVVNFSNPVVNGTWDVIGGNTFDPSGTSFTFRISTPINSGTIYVWADQALGADLLVSSSNWKEVGLIGAETIRTWTEERGDFRIGINTIARTNHAAVLTGNVDDFTKPRATLDIVGTTFISGRTLVQYDEVGNVTSNRYDSFNLNSDQRESLSGTTLANQGFVNQDNALLVGGDSNNLDQKATLRVATSDLATGDRGTTYRTGGRLGINTTLGLQPENELDRNFVVVGDGRITGNFKIEDDISVDGGDINTTSEVFNFINNNANILNLIGDAQVINFGNNTTNDQILSVGGSSNNQIVRIGSNAGTSLLSVHPNSTNANVDIASVADNAANSCKVVIGGAWQNTDSTLTIGTYQTIVDGTLEVGGQIAPGTGTARLFAQTKEVRLFDNDRTTEVNAFTSANRLNLGSLGGFTTIRNSLNVQASLTSDSNIILKGGTSAGIIEIIRGRFSTTPILHNTGSLDTPNIDFYKYTSTGRVIDTAGQSLWGNNTFLSGGGQISGFDNVNTSDPSDLRVAGNYTFVFPTGGSGSGAAFDVSVAFDGTVTLTIVSSGSGYNDNETLTILDSSVGGGGAPNITLDINGVNDPGDVYILPISIPAAADFDIGDLLLIDRGNPASPDEFSVLGGGTITGLRDQSKSEIVRVVGLTNLTDPTDPKGFRISVQRAQEGTGEYTDHPDGCIIAKLTKQSAASFITGVDINEDGILDEPRTGFNAGTTNVRIGVAEFGGILTSQDYLRLSESEIVGIADIISSDIQSLIVNDGGDPATIQFKVESTTGNTIIAGDLGVGLGYNKFTVDANNGNTAIAGTLTTENTLTINGSTVVGNQFFTITNGGSTGVPLRTTFQIDTANGNVTMNGGNISIFGTDGTTPRLTFNNSSGDFTTYGSFSALGDGTSTFGGPIEVAGDATINGGDLVVNSDGNEIFSVSDNGSVKIAGISNYFSSTGGRKWLYSAESVVNAETNTNYFLNVSGNTVFKLPAGAQMGDMIRIIDIGGVLKYDLSLVVRAPNLVGIQGSTSNTGVSMLGGVPTNQYLTSHSGGELVVQTPNAGFALVYAGTSTPDGLPGAPASKSGWYLVEV
Physico‐chemical
properties
protein length:3779 AA
molecular weight: 407235,15540 Da
isoelectric point:4,47132
aromaticity:0,08838
hydropathy:-0,23506

Domains

Domains [InterPro]
DC_0231
STR
1–131
DC_0231 IPR009050 DC_0231 DC_0231
DC_0231
STR
128–223
DC_0231 IPR009050
DC_0231
STR
201–304
DC_0231
CAF34283.1
1 3779
Architecture
STR
STR
STR 1-367 | STR 440-3779
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-PM2
[NCBI] 		238854 Uroviricota > Caudoviricetes > Pantevenvirales > Nodensvirus > Nodensvirus spm2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
08e9d72622b9a40323007491b91f3adcce05ff831982d4946912d06b29c9bba9
AlphaFold3
Source AlphaFold3
Method AlphaFold3
Resolution 0,8528
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50