Protein
View in Explore- Genbank accession
- CAB4132815.1 [GenBank]
- Protein name
- Bacteriophage P22, Gp10, DNA-stabilising
- RBP type
-
TSPTSP
- Protein sequence
-
MPYSKSPAISTYETKRVNFFQNANPRTPTGSPIVDNQRDCSLVNMMVESVPNPVQQSADVRLRSRPMVGPELVSPYLGTRGRGVYTIQRQDGTVGGISYFVVDNKVYTSFGSQIATLNTYTGSVGWAEFLSSTGQKSLILIDGVDGYIILSSSSGGFVSITKITSSNFPSPHVPNPIVLDGYLFLAKAGTNDIYNSDLDHPELWTAGNFISAEMYADNIVALAKNNNYLYAFGTDSVEFFYDAANPTGSPLARQQSAIQQMGCAIQESVIQTEKQVIFVGTTSNGNYTVWLIDGFQATEIGIPLIKNALAIEMAYNTIPNYTYRSAYVIRANNQKLYILRLTDRTFVYSFDTQMWTEWKSGTTTEINFVGAYGGEYFYADALLQKQNGAICRFINDGQYSSTSEDFMCTIVSQRLNFDTLNKKTMSRFALIGDALPDTESEVRIQWSDDDGQTWFPADLSYRTLQMSKTYSGDLPAIQQLGSFRQRSFKIKHIHKKTPFRLQGIEVNINKGIT
- Physico‐chemical
properties -
protein length: 513 AA molecular weight: 57132,60240 Da isoelectric point: 5,72672 aromaticity: 0,11696 hydropathy: -0,24893
Domains
Domains [InterPro]
DC_1658
STR
5–512
STR
5–512
IPR021098
STR
83–358
STR
83–358
SSF101898
RBD
116–364
RBD
116–364
1
513
Architecture
STR 5-512 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
513
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 497 | 497 | 0,8777 |
| Central domain | 498 | 502 | 6 | 0,0029 |
| C-terminal | 503 | 513 | 10 | 0,8789 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-497
1-497
Central
498-502
498-502
C-terminal
503-513
503-513
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAB4132815.1
[NCBI]
Genbank nucleotide accession
LR796268
[NCBI]
CDS location
range 26177 -> 27718
strand +
strand +
CDS
ATGCCCTATAGTAAATCTCCTGCTATTTCTACATATGAAACAAAACGTGTAAACTTTTTTCAAAACGCCAATCCACGGACCCCGACAGGCTCACCTATTGTCGATAATCAACGAGACTGTAGTTTAGTAAACATGATGGTTGAGTCTGTGCCGAATCCTGTACAACAATCCGCCGATGTTCGCCTACGTAGTCGGCCCATGGTTGGTCCAGAACTTGTTTCTCCGTATTTAGGAACTCGTGGCCGAGGGGTTTACACTATTCAACGACAAGATGGAACAGTGGGAGGTATTTCTTATTTTGTTGTAGATAATAAAGTTTATACGAGTTTTGGTTCACAAATTGCGACTTTAAACACCTATACCGGATCAGTTGGTTGGGCAGAGTTTTTATCTAGTACCGGACAAAAAAGTTTAATCTTAATTGATGGTGTAGATGGGTATATCATTTTATCATCATCCAGCGGAGGCTTTGTCTCCATTACAAAAATAACATCTTCCAATTTTCCAAGTCCACATGTTCCCAATCCTATTGTGTTAGACGGGTATTTGTTTTTAGCAAAAGCAGGTACAAATGATATTTACAATAGTGATTTAGATCATCCGGAACTTTGGACGGCTGGTAATTTTATTTCAGCTGAAATGTACGCTGATAATATTGTAGCTTTAGCAAAAAATAACAACTATTTATATGCGTTTGGTACAGATAGTGTGGAGTTTTTCTATGATGCTGCAAATCCAACAGGATCGCCGTTAGCTCGACAGCAATCGGCCATTCAACAAATGGGTTGTGCAATACAAGAATCAGTCATACAAACTGAAAAACAAGTTATTTTTGTTGGAACAACCTCTAATGGTAATTACACTGTATGGTTAATTGATGGTTTTCAAGCCACTGAAATTGGAATTCCGCTAATTAAAAATGCTTTAGCTATTGAAATGGCTTATAACACAATTCCAAATTACACGTATAGAAGTGCTTATGTGATTCGAGCCAATAATCAAAAACTATATATATTGCGATTGACTGATCGTACTTTTGTTTATAGTTTTGATACTCAGATGTGGACTGAATGGAAATCTGGCACAACAACAGAAATCAATTTTGTTGGGGCCTATGGAGGCGAATATTTTTATGCGGATGCACTTCTTCAAAAACAAAACGGGGCTATTTGTCGTTTTATAAATGATGGGCAATATTCATCGACAAGTGAAGATTTTATGTGTACCATTGTATCTCAACGTTTAAATTTTGATACTCTTAACAAAAAAACCATGTCTCGTTTTGCTTTAATTGGGGATGCTCTTCCTGACACGGAATCGGAAGTGCGTATACAATGGTCCGACGATGATGGACAAACCTGGTTTCCTGCCGACCTGAGTTATCGAACTTTACAAATGTCTAAAACATATTCTGGAGATTTGCCAGCAATTCAACAATTGGGATCGTTTCGACAACGTAGTTTTAAAATAAAACACATTCATAAGAAGACACCATTTCGCCTTCAGGGCATTGAAGTAAACATTAACAAAGGAATTACATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
07d5184ac081b084661367aeaad91294db38861b9ad3445716051adc48169bc3
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50