Protein

View in Explore
Genbank accession
YP_007010892.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLGQAFRATSGLDAAGEKLINVAMADKTILSDGVSVGFFHKYNTIYEYDSTRGYDAKHAVIYERRIYYAKADIASPAGAFDVSKWTGLRVDPTWQFINSTGPALQLSSGQYITADNRFNNLVLNLPTSPVDGDTLVIKDVGGQPGVNDLEFVSIGTAVIEFKAASVGARFRATVPFCQYMFVYKAAGNRWQVDVTATSTNSYFVEPSIQGFQLQSGMVTWRRTAAGTIRLILPKHARHGDVITTHDIDGMNPINHSTLEIYPGSGHSINETGVTKIESRTSGYGSFVFDFPSLTWKVWDGDQRTRIRVIKTDTSMLPFEHILVTGSSNLPSQTTVLTLPKEVAIGDRVQITMDYLRKGQTCTIRVSPGSNELIVGSKAQMQFQRRSEYPMTNGWELVSSISISADTDYVPYVELMYAQLDPSLVGVTSSQYGWMIGNVQPKVERVDATRRDRLGVAALADQAEVNKNHEDNPNDETIVTPKTLANKTATETRRGIARLATTAEVNQLSTSTYLDDIIVTPKKLNERTATETRRGLAEIATQAEANGSTDDITIVTPKKLHNRIASETLTGILAVVSKNGTAGTTRSAAGTGVYNKADHSKAVTPLTLDEFKATETAKGIGYIATQAEVDGGSSDPLGPLLVTAERLGARRATESNHGLIEIATQTETNAGTDDTRAITPKKLNDRTSTETLAGIARIANTSEIDTATNDLTIVTPLKLKNRFNNTDRISVNTADGLTQSGTIWSTVSVGISLATEAQRGTLRVSTQLEANGSSSDNTIVTPKKLDGRKATRTLDGIIRVATTDEVRTGTATNLAVSPEDFKYIAQTEPTWSGNETRRGFVKAATVESTFVGNNTVGSTQAYTSYANDGLAVSPRGLNYALQNYLPLNATAQNALSLGGVVSSEWVRRTVDQTITGAMNFTAPMTTKAVTGTTSTFNLAFIESNRSDALTVGSAVNTGVTGITFIGGTSGSNRWKLYAGNDSAIDGVGGGGIGFAPGVAGPVFHVTTAGDSWTQRNIVSHAGNLSLESASAGISMGGAHFASVSTTDNRMNIGTGLRNVVINSAGDNAKIGIYDIIHTGNQASKLNPVYLRRDGGNTQTGKVLAEMAGDVKYSTFRNDNRYISSRGNDFVFGNTDTTNGRVCLDTNQNPIVKIGNFEYEIYHKGNKPTAQDVGAIDITGSSSNNITIRDWIKIGNVKIVANNLTKTVEFIWEE
Physico‐chemical
properties
protein length:1212 AA
molecular weight: 130211,83520 Da
isoelectric point:6,43454
aromaticity:0,06931
hydropathy:-0,28168

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007010892.1
1 1212
Domain Start End Length (AA) Confidence
N-terminal 1 834 834 0,7905
Central domain 835 1033 200 0,2316
C-terminal 1034 1212 178 0,8033
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-834
Central
835-1033
C-terminal
1034-1212

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Aes508
[NCBI] 		1198013 Uroviricota > Caudoviricetes > Pantevenvirales > Tulanevirus > Tulanevirus aes508
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007010892.1 [NCBI]
Genbank nucleotide accession
NC_019543 [NCBI]
CDS location
range 135393 -> 139031
strand +
CDS
ATGTTAGGACAAGCCTTTCGCGCCACAAGCGGCCTTGATGCAGCTGGCGAAAAACTGATCAACGTTGCAATGGCCGATAAGACAATTTTGTCCGATGGCGTTAGCGTTGGATTTTTCCACAAATATAACACAATTTACGAATATGACAGCACACGTGGTTATGATGCAAAACACGCTGTAATTTACGAGCGTCGAATTTATTACGCGAAAGCAGATATTGCTTCCCCAGCAGGAGCTTTCGACGTTTCAAAATGGACTGGTCTCCGTGTTGACCCAACATGGCAGTTCATTAACTCGACTGGGCCCGCACTTCAGCTGAGTTCTGGTCAATATATCACTGCTGACAATAGATTCAACAATCTGGTTTTAAACTTGCCAACATCACCAGTCGATGGCGATACTTTGGTAATAAAGGACGTAGGCGGTCAGCCAGGTGTTAACGATCTGGAATTTGTATCTATAGGAACAGCTGTCATTGAATTCAAGGCAGCCAGTGTCGGTGCTCGCTTCCGTGCAACTGTCCCGTTCTGTCAGTACATGTTCGTCTATAAAGCAGCCGGAAACAGATGGCAGGTAGATGTAACTGCTACATCGACAAATAGTTATTTCGTTGAGCCATCTATTCAAGGATTCCAGTTACAGTCAGGGATGGTTACCTGGAGACGTACTGCCGCAGGAACAATCCGTCTTATTCTGCCAAAACATGCCAGACATGGCGATGTAATTACAACCCATGATATTGATGGGATGAACCCGATTAACCACTCGACTCTTGAGATTTATCCAGGTTCAGGTCACAGTATTAATGAAACTGGTGTTACAAAAATCGAGTCGCGCACATCTGGTTACGGCTCATTCGTATTCGATTTTCCTTCTTTGACTTGGAAAGTATGGGATGGAGACCAAAGGACACGTATTCGTGTTATCAAAACTGACACGTCAATGTTGCCGTTTGAACACATTCTGGTGACTGGCAGCAGTAATTTGCCAAGTCAGACCACCGTGCTGACTCTTCCAAAGGAAGTAGCCATAGGTGACCGTGTTCAAATCACCATGGATTATCTGAGAAAAGGTCAAACTTGCACAATCAGGGTAAGTCCAGGTTCAAATGAGTTGATTGTTGGTTCGAAAGCTCAAATGCAGTTCCAGCGTCGTTCGGAATACCCGATGACAAATGGGTGGGAATTGGTTTCATCTATTTCTATAAGTGCTGACACAGATTACGTTCCATATGTCGAACTAATGTACGCGCAGTTAGACCCGTCCCTGGTGGGTGTTACTTCTTCACAATACGGATGGATGATCGGAAATGTTCAACCGAAAGTTGAACGTGTTGATGCAACTCGTCGTGATCGTCTGGGTGTGGCTGCTCTCGCGGATCAAGCAGAAGTAAACAAAAATCACGAAGATAACCCGAATGACGAAACTATTGTCACTCCAAAAACATTAGCTAATAAGACTGCTACTGAAACTCGTCGTGGCATTGCCCGTTTGGCAACAACCGCTGAAGTCAATCAGTTAAGCACTTCAACTTATTTGGATGACATTATCGTCACTCCGAAAAAGTTAAATGAAAGAACTGCTACCGAAACTCGGCGTGGTTTAGCGGAGATTGCAACTCAAGCAGAAGCAAACGGCTCAACTGACGACATAACAATTGTGACTCCCAAAAAGTTGCATAATCGTATTGCGTCAGAAACTCTGACTGGTATCTTAGCCGTGGTTTCTAAAAATGGAACAGCTGGTACAACTCGCTCGGCTGCTGGGACTGGCGTGTATAACAAAGCCGATCATTCGAAGGCTGTCACACCGTTAACCCTGGATGAATTCAAGGCTACCGAAACAGCTAAGGGTATAGGTTATATTGCCACACAGGCGGAAGTCGACGGGGGATCATCTGATCCACTTGGTCCATTGCTTGTGACAGCCGAAAGATTGGGTGCTCGCCGAGCGACAGAATCAAATCACGGTTTGATTGAGATTGCAACCCAGACCGAAACAAATGCCGGAACTGATGATACACGTGCTATTACTCCCAAAAAGTTGAATGATCGCACTTCAACAGAAACTCTCGCTGGTATTGCCCGTATTGCCAATACATCTGAAATAGATACTGCGACAAACGATTTAACTATCGTCACTCCGTTGAAATTGAAGAATCGTTTCAACAATACAGATAGAATTTCGGTAAACACGGCTGATGGTTTGACCCAATCTGGAACCATTTGGAGCACTGTTTCTGTTGGAATAAGTCTTGCTACAGAAGCTCAACGCGGGACATTGCGTGTTTCAACCCAACTTGAGGCGAATGGATCTAGTTCAGACAATACTATCGTAACTCCAAAGAAACTCGATGGAAGAAAAGCGACAAGAACTCTGGACGGTATTATCCGGGTTGCGACAACCGATGAAGTTAGAACTGGAACAGCAACTAATTTGGCTGTTAGTCCAGAAGACTTCAAGTATATAGCGCAAACTGAACCGACATGGTCAGGAAATGAAACACGTCGTGGGTTTGTCAAAGCAGCAACAGTAGAGTCGACTTTCGTTGGAAACAACACTGTCGGATCCACTCAAGCATACACAAGCTATGCAAATGACGGTTTGGCTGTTAGCCCTCGTGGATTGAACTATGCACTGCAAAACTACTTGCCGCTGAATGCTACAGCGCAGAACGCGTTGTCTCTGGGTGGTGTAGTTTCCAGTGAGTGGGTTCGCAGAACAGTAGATCAAACTATAACTGGCGCAATGAATTTCACCGCCCCAATGACCACTAAGGCTGTAACTGGTACAACATCGACATTTAATTTGGCCTTTATCGAGTCAAATCGATCGGATGCGTTGACTGTCGGGTCGGCCGTTAATACAGGGGTCACTGGTATTACCTTTATTGGTGGAACATCGGGTTCCAACAGGTGGAAACTTTACGCCGGAAATGACAGTGCCATTGACGGGGTCGGTGGTGGTGGTATTGGATTTGCGCCAGGCGTGGCTGGACCAGTATTCCATGTTACAACCGCCGGTGATTCATGGACACAGCGCAATATTGTCTCTCACGCTGGCAATCTTAGTCTTGAGTCAGCTTCCGCAGGAATTTCGATGGGCGGGGCTCATTTTGCGTCGGTTAGCACAACTGACAACAGGATGAACATTGGCACAGGGTTGCGCAACGTTGTGATAAATTCGGCCGGTGACAACGCCAAAATTGGAATTTATGACATCATTCACACCGGTAACCAGGCTTCTAAATTGAATCCGGTATATCTGCGTCGAGATGGTGGAAACACTCAAACAGGCAAAGTCTTGGCTGAAATGGCTGGTGATGTGAAATACAGTACCTTCCGAAACGATAACCGTTATATTTCGTCTCGCGGAAATGATTTCGTTTTCGGAAATACCGATACAACGAATGGTAGAGTTTGTCTCGATACGAATCAGAATCCAATCGTAAAGATCGGAAACTTTGAGTACGAGATTTATCACAAGGGTAACAAACCTACCGCTCAAGACGTAGGTGCAATTGATATTACAGGTTCATCTTCCAATAATATAACGATTAGAGATTGGATCAAAATTGGTAATGTGAAAATCGTTGCCAACAACTTGACCAAGACAGTTGAGTTTATCTGGGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21e014d88f9ad1f0ca870454c02e75f853823524a2ba16f752ef96a2c6f17557
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Aeromonas salmonicida phage Aes508 complete genome Petrov,V.M., Ratnayaka,S. and Karam,J.D. 1988-10 — GenBank