Protein

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Genbank accession
WVM00963.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPTRSPEIITRASEVDEDLVPEPWDPRDADSDRSLVAERERYRLQDATDGQGAGIVPAYNLNVADTGSIPSNTQDGWTRGSAGRVLGPDGKYVSRGSDVPRKSFDGEEPGLLVEAAGRTNHVTDSSDLSAGWATFGTSNSAASNLIEGESAQSVSAPTKSDRSNQGAGTFSSGTETVYVILEEETAGQWALSVLDASASSDLCFVQHDFSDDSLFVARGSVDRKNLRVLSESGPNGGRVYQLVLSYSGQTSGNTREVRVFPDRTGSDNSTIFHHVQLEEAPNASSPIVTRGSPTTRSGDDYAIFEGGQPPWWNSNEGTIITVNTRPTFNEKNPILFGFDGTTSGFVQNRGFEYRAFDGANTTAVSVADTPFQKSKVALSFDGTEFILSANGVSSKQASQGSILSSGKLELAPSGRLPGLYHRLLYARRALPESTLNRITA
Physico‐chemical
properties
protein length:440 AA
molecular weight: 47051,70960 Da
isoelectric point:4,81321
aromaticity:0,07727
hydropathy:-0,49773

Domains

Domains [InterPro]
DC_1416
STR
24–440
DC_1416
NF048003
Unmapped
117–297
NF048003
WVM00963.1
1 440
Architecture
STR
STR 24-440
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVM00963.1
1 440
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,9617
Central domain 37 235 200 0,0045
C-terminal 236 440 204 0,9828
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-235
C-terminal
236-440

Taxonomy

  Name Taxonomy ID Lineage
Phage Salinibacter phage 5_12
[NCBI] 		3113513 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVM00963.1 [NCBI]
Genbank nucleotide accession
OR896296 [NCBI]
CDS location
range 41653 -> 42975
strand +
CDS
ATGCCAACACGCAGCCCTGAAATCATCACCAGAGCAAGCGAGGTAGACGAGGACCTCGTGCCCGAGCCGTGGGACCCCCGCGATGCTGACAGCGACCGATCCCTCGTGGCCGAGCGGGAGCGGTACAGGCTCCAAGACGCGACAGACGGGCAAGGCGCGGGGATCGTGCCTGCCTACAACCTCAACGTCGCGGATACCGGATCTATACCGTCGAATACGCAAGACGGCTGGACACGCGGCAGCGCGGGGCGGGTGCTTGGGCCAGATGGCAAGTACGTGTCACGCGGGAGCGACGTGCCGCGCAAGAGCTTCGATGGCGAGGAGCCGGGGCTGCTCGTGGAGGCGGCGGGGCGGACGAATCACGTCACAGATTCCTCTGACCTTTCAGCGGGTTGGGCAACATTTGGTACGAGCAATTCAGCCGCAAGTAATTTAATAGAAGGGGAAAGTGCTCAATCTGTAAGTGCACCGACAAAATCTGATCGCTCAAATCAGGGAGCAGGTACGTTTAGCAGCGGCACAGAAACCGTTTACGTAATCCTAGAGGAAGAAACGGCGGGCCAGTGGGCACTTTCGGTGCTTGATGCAAGTGCTTCATCGGACTTATGCTTTGTCCAGCACGATTTTAGCGACGACTCGTTATTCGTAGCCCGTGGGTCTGTGGACCGGAAAAACCTAAGAGTTTTATCTGAAAGTGGTCCCAACGGTGGGAGGGTATATCAACTTGTTTTATCTTACAGCGGCCAAACATCGGGTAACACCCGTGAAGTACGTGTCTTTCCTGACAGAACAGGTAGTGATAACAGCACAATATTCCATCACGTTCAGCTTGAGGAAGCCCCCAACGCCTCCTCGCCCATCGTCACCAGAGGCAGCCCGACGACGCGGAGCGGGGACGACTACGCGATTTTCGAGGGCGGGCAGCCGCCGTGGTGGAATTCGAATGAGGGGACGATCATTACAGTCAACACTAGGCCTACATTTAACGAAAAAAACCCTATTTTATTCGGCTTTGATGGTACTACATCGGGATTTGTGCAAAATAGAGGCTTTGAGTATAGAGCCTTTGATGGAGCAAACACAACTGCTGTAAGTGTAGCTGATACGCCATTTCAAAAGAGCAAAGTTGCGCTCTCATTTGACGGTACTGAGTTTATACTGTCAGCAAACGGCGTCTCGTCTAAGCAGGCTTCTCAGGGTAGCATACTTTCGTCTGGTAAACTAGAACTTGCACCAAGTGGCCGCCTGCCGGGGCTTTACCATCGCCTGCTATATGCCCGCCGCGCCCTCCCCGAATCGACGCTCAACCGCATCACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8405ac4a4339d5244b0a4ad2a2e9d2981953ab6aaf63323fb67a0369f8b1f2b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8148
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Experimental evolution at ecological scale allows linking viral genotypes to specific host strains Ramos-Barbero,L., Aldeguer-Riquelme,B., Viver,T., Villamor,J., Carrillo,M., Lopez-Pascual,C., Konstantinidis,K., Martinez-Garcia,M., Santos,F., Rossello-Mora,R. and Anton,J. 2023 — GenBank