Protein

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Genbank accession
QZI88449.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSLYIGRDNSGNGIFHATKDEQSETSLKAGVNEKTLFHSDIPFIRVSKTYNLGLTYRESRPPNYSDNFSTTSEYWAFPSAMKTDLRNGYVFLGFATMSDGSKIQIQSDKFCAHVDGSRVTASQGGGNWFFHQYGHSQEWGGSTASGLRFGFPISNSIKYFWSQNGSIDAWFSQNSSANWYSPGAGGWFSRQTSSTVNSSTNHPPYLHRDSAGVLLLRCGRGLNGPNVKLNDVVSGTTANANVTPFATSIVYYRLDVKANSSGYYPVTLSATLPGELYIDNSKLLTNGVDHLSNLKYIKFRGFYGNNTTVGATTSGGTLLPGNTYNYTQSVGGWPHGMLPTYTEVLYTGSADVPGHRKPYAVYVGGKYKTHTYGNFTGIVLTATTRTITPTSTMNNAVSLLPSYNGTLFELVSIPSVNEIEFTNTSFRINNSIDLYTSSNQPIACIGEQRKLQLDTTNRNIYPGGVVSTLEDSINLGSGLGSHLHLLFGMDGINTTDNYVRAYWDRTGGTLNMYPPTDARTTDPDLGPQLAAIPQNGYVHIGSMRFIGRDFYTTPNQQAAVGVSLTLRYTGTTLQLWSHARNVSTVGNYMQYRMPRASINIMRLTSG
Physico‐chemical
properties
protein length:606 AA
molecular weight: 66402,06790 Da
isoelectric point:8,97247
aromaticity:0,11716
hydropathy:-0,36997

Domains

Domains [InterPro]
IPR059609
RBD
1–604
IPR059609
QZI88449.1
1 606
Architecture
RBD
RBD 1-604 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI88449.1
1 606
Domain Start End Length (AA) Confidence
N-terminal 1 37 37 0,1269
Central domain 38 236 200 0,2063
C-terminal 237 606 369 0,8540
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-37
Central
38-236
C-terminal
237-606

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 70E35.2
[NCBI] 		2859341 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI88449.1 [NCBI]
Genbank nucleotide accession
MW824422 [NCBI]
CDS location
range 5157 -> 6977
strand -
CDS
ATGAGTTTATACATAGGAAGAGATAATAGTGGGAATGGTATTTTCCACGCAACAAAAGATGAGCAGTCAGAGACCTCATTAAAAGCGGGGGTGAATGAGAAGACCTTATTCCATTCCGATATACCGTTTATTAGAGTAAGTAAGACCTATAATTTGGGTCTTACCTATCGGGAATCACGCCCACCAAACTACTCTGACAACTTCAGTACCACTAGTGAGTACTGGGCTTTCCCGTCAGCCATGAAAACCGACCTTAGGAATGGGTATGTGTTCCTAGGGTTCGCTACGATGTCCGATGGTTCTAAAATACAGATACAGTCTGATAAGTTCTGCGCGCACGTAGATGGTAGTAGAGTTACCGCATCTCAGGGTGGTGGTAACTGGTTCTTCCATCAGTACGGGCATAGCCAAGAGTGGGGCGGATCTACAGCTAGTGGACTACGCTTCGGATTTCCAATTTCTAACTCTATTAAATACTTCTGGTCACAGAATGGTTCAATAGATGCGTGGTTCTCTCAGAACTCCTCGGCAAACTGGTACAGTCCAGGCGCAGGCGGGTGGTTCTCTAGACAAACCTCTAGTACTGTTAACTCTAGTACCAATCATCCACCATACCTACATAGAGACTCCGCAGGTGTTTTACTATTACGTTGTGGTAGAGGACTCAATGGGCCTAACGTTAAACTTAATGACGTGGTATCTGGTACTACTGCCAACGCTAATGTAACCCCATTCGCTACGTCTATTGTGTACTACCGACTAGATGTTAAGGCTAATAGTTCAGGATACTACCCTGTAACATTAAGTGCAACACTCCCCGGCGAACTCTACATTGATAATTCTAAGTTACTTACCAATGGAGTAGATCATCTCTCTAATCTTAAGTACATTAAGTTCAGAGGCTTTTACGGGAATAATACTACTGTAGGTGCAACTACTTCAGGAGGTACGCTACTACCAGGTAATACTTACAACTACACCCAATCCGTCGGGGGATGGCCTCACGGTATGTTACCTACGTACACGGAGGTTCTATATACTGGATCAGCTGATGTTCCTGGACATAGAAAGCCTTATGCGGTATACGTAGGTGGTAAATATAAAACCCATACTTATGGTAACTTCACTGGAATAGTACTTACTGCTACCACTAGAACCATAACCCCTACATCCACCATGAACAATGCGGTATCCTTACTACCTAGTTACAATGGTACGTTGTTTGAGCTAGTATCTATTCCGTCTGTTAATGAAATAGAATTTACTAATACATCTTTTCGTATTAACAATTCTATCGATCTATATACGTCATCAAACCAACCTATCGCATGCATCGGCGAACAGCGTAAGTTGCAGCTAGATACTACTAACCGTAATATCTACCCAGGTGGTGTGGTATCTACACTAGAGGATTCTATTAATCTAGGAAGTGGCTTGGGTTCGCATCTTCATTTACTATTTGGTATGGATGGTATTAATACGACCGATAATTATGTTAGGGCTTACTGGGATAGGACAGGTGGTACTTTGAATATGTACCCACCAACTGACGCTAGGACTACTGATCCCGACTTAGGGCCTCAACTAGCAGCTATTCCACAGAATGGTTACGTACATATTGGTTCTATGCGCTTTATTGGAAGGGACTTCTACACTACGCCTAACCAGCAAGCAGCCGTCGGAGTATCATTAACCCTTCGATACACTGGAACCACTCTCCAACTCTGGTCACATGCTAGAAACGTGTCGACTGTTGGGAACTACATGCAATATCGTATGCCTCGTGCATCCATTAATATAATGCGGTTGACGTCCGGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2ddd4cdcf218c098c89be4413dbcf4e373dbd2aca9533e33c93c30596165e475
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2498
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50