Protein

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Genbank accession
XAO14086.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDTGNIIDLGIAKGGQIDGNVTIDGTLRVNGPINNFGNFSTSGTITASNIVSATVFRSTSGSFYTRAINDTAKAHLWFENTNGSERGVLYSNPQSENEGVITMRVRQGTAAEAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKSFGQYDSQSLVNYVYPGTGETNGVNYLRKVCATSGGTIYHEIVTAQKGLSDEVSWWTGNTPLFKLYGIRSDGRLIIRNSLAIGTVTGGFPSSDYGNVEALGNIFLALGDNGTGLRYRKTGVFDFVGSGLSVASITPDSFRSTRKGIFGRSEDQGATWIMPGTNAAFLTVQTQADENTAGDGQTHIGYNSGGKMSHYFRGKGQTNINTQEGMEVNPGILKLVTGSNNVQFYANGTVSSIQRIKFDNGLVLTGARPDGIQLDAPTTTDGTKTILWAGGTREGQNKSYVSIKAWGNSFNASGDRNRETVFEVADGQGYYFYAQRTNPASGQTVGPVNFKFNGTVETGHIIGLGNISASGTGSFGGNVTMSNGLFVQGGSSITGQVKIGGTADALRIWNAEYGAIFRRSEDKLYIIPTPQNAGESGGISNLRPFTMTLSTGKMEFKHDVGLGDNGSGGSILFVDNTNKATTNNGRLYVNMTSDAIVLNAPTQETSNFIQGRKANVTKWYVGIGDSGDSVRMHSYAYSHGLVLSANSVDITKPLKVGNAQFGTDGNITGGSGNFANLNTTINNLKTDIVSSYPIGAPIPWPTDTPPDGYAIMEGQTFDKSAYPKLAMAYPSGALPDMRGQTIKGKPSGRAVLSTEADGVKSHSHSASASSTDLGTKNTSSFDYGTKTSSSFDYGTKTSNTTGNHNHTVSGTTGAAGNHQHSQTGPRGPNNQPTGIFPNGSTLISGTQVVGFGLSNGVVPGSSQYIAKSSTEGNHTHSWSGTTSSTGNHAHTVGIGAHTHTVGIGAHSHTVAIGSHGHTITVNATGNTENTVKNVAFNYIVRLA
Physico‐chemical
properties
protein length:1023 AA
molecular weight: 107699,54070 Da
isoelectric point:8,83019
aromaticity:0,08113
hydropathy:-0,36168

Domains

Domains [InterPro]
DC_1954
STR
1–1018
DC_1954
G3DSA:6.20.80.10
STR
673–732
G3DSA:6.20.80.10 SSF88874 SSF88874
IPR048388
ATT
675–749
IPR048388 IPR037053
IPR051934
Unmapped
701–1023
IPR051934
IPR011083
ATT
775–822
IPR011083
XAO14086.1
1 1023
Architecture
STR
ATT
STR
ATT
STR
STR 1-674 | ATT 675-749 | STR 750-769 | ATT 770-823 | STR 824-1022 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO14086.1
1 1023
Domain Start End Length (AA) Confidence
N-terminal 1 407 407 0,0931
Central domain 408 606 200 0,2995
C-terminal 607 1023 416 0,9071
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-407
Central
408-606
C-terminal
607-1023

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JM10
[NCBI] 		3128064 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO14086.1 [NCBI]
Genbank nucleotide accession
PP400777.1 [NCBI]
CDS location
range 48832 -> 51903
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATACAGGAAATATCATTGATCTAGGTATTGCTAAAGGCGGTCAAATTGATGGAAATGTAACTATTGATGGAACTTTACGCGTCAATGGACCAATAAACAACTTTGGAAATTTTTCTACAAGTGGTACTATTACGGCAAGTAATATTGTTTCTGCTACAGTATTCAGATCAACATCCGGTTCATTTTATACAAGAGCAATAAATGATACTGCAAAGGCCCATCTTTGGTTTGAAAATACAAATGGCTCAGAACGTGGCGTTTTATATTCAAACCCGCAGTCTGAAAATGAAGGCGTAATTACAATGCGTGTTCGTCAAGGAACCGCTGCGGAAGCTCAAAATTCAGAATTTCATTTCATTTCTACTGATGGCGGTATCTTCCAGGCACGCAAATTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAATCATTTGGACAATATGATTCACAATCTTTGGTTAACTATGTTTATCCTGGAACTGGTGAAACGAATGGTGTAAACTATCTTCGTAAAGTTTGCGCTACGTCCGGTGGTACAATTTATCATGAAATTGTTACTGCACAAAAAGGCCTGTCTGATGAAGTTTCTTGGTGGACTGGTAATACACCATTATTTAAACTATATGGTATTCGTAGCGACGGCAGACTGATTATCCGCAATAGCCTGGCCATCGGTACTGTGACGGGAGGGTTTCCGTCAAGCGATTATGGCAATGTTGAGGCACTAGGAAATATATTTCTTGCTTTAGGTGATAACGGGACAGGTTTACGCTATCGAAAAACCGGGGTATTTGATTTCGTTGGTTCTGGACTATCTGTCGCATCTATTACACCTGACAGTTTCCGTAGTACTCGTAAAGGTATATTTGGTCGTTCCGAGGACCAAGGCGCAACTTGGATAATGCCTGGGACCAACGCCGCGTTTTTAACGGTTCAAACACAGGCTGATGAAAACACTGCTGGAGACGGTCAAACCCATATTGGATATAATTCTGGCGGGAAAATGTCCCACTATTTCCGTGGTAAAGGCCAAACTAATATTAATACTCAAGAAGGCATGGAAGTTAACCCGGGTATTTTGAAATTGGTAACTGGCTCTAATAACGTACAGTTTTATGCTAACGGAACAGTATCTTCAATACAAAGAATTAAATTTGATAATGGATTAGTTCTTACTGGTGCTAGACCCGATGGTATTCAACTTGATGCTCCTACAACAACAGATGGCACTAAAACTATATTGTGGGCCGGCGGTACTCGTGAGGGTCAGAATAAAAGTTATGTATCTATTAAAGCATGGGGTAATTCATTTAACGCATCTGGCGATCGTAATCGTGAAACGGTTTTTGAAGTAGCTGATGGACAAGGATATTATTTCTACGCTCAACGTACTAATCCTGCGTCAGGTCAAACAGTAGGTCCGGTTAACTTTAAATTTAACGGAACTGTCGAAACAGGCCATATCATAGGCCTTGGTAATATAAGTGCCTCCGGTACAGGTTCTTTTGGTGGCAATGTTACTATGTCTAACGGTTTGTTTGTCCAAGGTGGTTCTTCTATTACTGGACAAGTTAAAATCGGCGGAACAGCTGATGCATTAAGAATTTGGAATGCTGAATACGGGGCTATTTTCCGTCGTTCTGAAGATAAACTTTATATTATTCCAACTCCACAAAATGCTGGTGAATCAGGTGGTATTTCTAATTTACGTCCATTTACCATGACTCTTAGTACTGGTAAAATGGAATTTAAACATGATGTTGGACTTGGTGATAACGGCTCCGGTGGAAGCATATTATTTGTAGATAACACTAACAAAGCCACTACTAATAACGGTCGTTTATACGTTAATATGACAAGTGATGCTATAGTGCTTAATGCTCCTACACAAGAAACATCTAACTTTATCCAAGGACGCAAAGCTAACGTCACTAAATGGTATGTTGGTATTGGCGACAGTGGTGATTCTGTTCGTATGCATAGCTATGCATATTCCCACGGCTTGGTATTAAGTGCTAACTCCGTTGATATTACTAAACCGTTAAAAGTTGGTAATGCTCAATTCGGTACTGATGGTAATATCACCGGTGGTTCTGGTAACTTTGCCAACTTGAACACCACAATAAATAACCTTAAGACGGATATCGTCTCAAGTTATCCAATTGGCGCTCCGATTCCTTGGCCAACGGATACTCCTCCTGACGGTTACGCTATTATGGAAGGTCAGACTTTTGATAAGTCTGCATACCCAAAATTGGCTATGGCTTACCCATCTGGCGCTCTGCCTGATATGCGTGGTCAAACTATCAAGGGTAAACCATCTGGGCGTGCTGTATTAAGTACAGAAGCCGATGGTGTTAAGTCACATAGCCATAGTGCAAGTGCATCAAGCACAGATTTGGGTACTAAAAACACATCAAGTTTTGATTATGGTACTAAAACCTCTTCAAGCTTTGATTATGGTACGAAGACTAGCAATACAACAGGTAACCATAACCATACAGTAAGCGGTACTACTGGTGCAGCAGGTAACCACCAGCACTCACAAACCGGTCCAAGGGGTCCTAATAATCAACCAACAGGAATATTTCCTAATGGATCTACTCTAATTAGTGGAACCCAGGTTGTTGGTTTTGGCCTAAGCAACGGTGTCGTGCCTGGTTCAAGCCAATATATTGCAAAGTCATCGACAGAAGGTAACCATACACACTCTTGGTCTGGTACTACTAGCTCTACGGGTAACCATGCTCATACTGTAGGTATTGGTGCTCACACTCACACGGTAGGTATTGGTGCTCATTCTCATACTGTTGCAATTGGTTCCCATGGACATACAATAACTGTAAATGCCACAGGAAATACAGAAAACACAGTTAAAAACGTTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0141179cc609473d689a89242781a28f8b2a795fe8345c682300ca96711dc91e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank