Protein

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Genbank accession
AFJ76036.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSRYDHSTVEYTDKIKDLTDSVNRVGNYLSGDNSPYDDVQKLKAITQNIKLTKDTGLAKSITAGTTALRSVVEVGVYYINSTEALALTDKPPELTGAFILVNYPTTASTSVKQEVHMFATGTTGSYVGYRWISASSVSSWWTYENTLGSQAKADKALADGKTYTDSSVNSALQAIQNSAQMYKLTEDDGKPIDASAMATPPTSVASLTKTGIYYFTTAFGNTMPDTPCTGQSFWLVVLQHVTDNSISQSVTANTVAVERVVADRIITTLGVPSKWEYRAKASNFFFSASNSSRITLVSTQQNIITPNKFINNPGSLPLSAINPAITIPEDGMYQVMAALNINGILAEVYLVSELTLLVNDVVHPATFGMVKTANNANGQYSLAGNGIYQLKKGDKLKLRSYCNNTGNNPYLDVDKLYISVGKIADISLFK
Physico‐chemical
properties
protein length:430 AA
molecular weight: 46558,91520 Da
isoelectric point:6,44573
aromaticity:0,08837
hydropathy:-0,15256

Domains

Domains [InterPro]
DC_1285
ATT
1–158
DC_1285 IPR008983
DC_1773
STR
152–401
DC_1773
AFJ76036.1
1 430
Architecture
ATT
STR
RBD
ATT 1-158 | STR 159-401 | RBD 402-418 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage vB_LmoM_AG20
[NCBI] 		1168744 Uroviricota > Caudoviricetes > Herelleviridae > Pecentumvirus > Pecentumvirus AG20
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFJ76036.1 [NCBI]
Genbank nucleotide accession
JQ797329 [NCBI]
CDS location
range 72596 -> 73888
strand +
CDS
TTGTCTAGATACGACCATAGTACTGTAGAGTACACAGACAAAATTAAGGACTTAACAGATTCGGTAAACCGAGTAGGAAACTACTTATCAGGAGACAATAGCCCTTATGACGATGTTCAGAAATTAAAAGCAATTACACAAAATATTAAGCTAACTAAAGATACAGGTTTAGCTAAAAGCATTACAGCAGGAACAACTGCGTTGAGGTCAGTAGTCGAAGTAGGGGTTTACTATATTAATAGCACAGAAGCTCTAGCCCTAACTGATAAACCCCCAGAGCTAACAGGAGCCTTTATACTAGTAAACTACCCGACAACAGCCTCTACTTCTGTTAAGCAAGAAGTACACATGTTTGCTACAGGAACAACAGGTAGCTACGTAGGGTACCGATGGATTTCTGCTTCTAGTGTCAGCTCATGGTGGACTTATGAAAACACACTAGGTTCACAAGCTAAAGCAGATAAAGCATTAGCGGACGGGAAAACATATACTGATAGCTCAGTAAACTCCGCTTTGCAAGCAATTCAAAACTCAGCACAGATGTACAAGTTAACCGAAGACGATGGCAAGCCAATTGATGCTTCTGCTATGGCTACTCCACCAACTAGTGTAGCTTCTCTAACGAAGACAGGAATATATTACTTTACTACCGCTTTTGGAAATACAATGCCAGATACCCCTTGTACAGGGCAATCATTCTGGTTGGTTGTTTTACAGCATGTAACAGATAACAGTATATCACAATCTGTGACAGCCAACACTGTAGCAGTAGAGAGGGTAGTCGCAGATAGGATTATTACTACTCTAGGGGTACCGAGTAAGTGGGAATACAGAGCTAAAGCCTCTAATTTCTTCTTTAGTGCTTCCAACTCGTCACGTATAACACTAGTATCGACCCAACAGAATATTATAACACCTAATAAATTTATTAATAACCCCGGTAGTTTACCGCTATCTGCGATAAACCCTGCAATAACTATTCCAGAAGATGGGATGTACCAAGTGATGGCGGCCTTAAACATTAACGGTATTTTAGCTGAAGTGTACCTAGTAAGTGAGTTAACTCTACTAGTAAATGACGTAGTACACCCAGCTACATTTGGAATGGTAAAAACAGCAAATAATGCTAACGGGCAGTACTCTTTAGCAGGGAATGGCATATATCAACTAAAAAAAGGGGACAAGTTAAAACTAAGAAGTTATTGTAACAATACAGGAAATAACCCTTACTTGGATGTAGATAAACTTTATATATCTGTTGGTAAGATTGCAGACATTTCATTATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b9d42324e0032bf5063cf465a76ac76aa740e911660ba90ffea3fb5d19a08a2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8096
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50