Protein

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Genbank accession
WNO48732.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MATLLLIENAFRPDANPRQEPVRAGERISSMLRRVGYLKGRGAKAVRKVPFIVVRNGEPVLIAQMSTRIKAKDHISVIHLPKGGGGGSNPLQMVLTVAIAVAAAYTGGLAATAFGSQLAGAAVSAAVMIGGTLLLNMFFPPQMPSAMSLNREKASPTYSISSQGNQARLMEAIPVLYGRFRTFPDLASAPYTESRGNETYLYQLFCITQGQMDIETIQVENDNVSTYGEIEYQVVNPGQSVTLFPDNVISSPAVNNFELTAPDEPGNIKGPFAVSNPGVQVNYVGIDLYLPGGAYRMNDKGRFETSKVNVKFEYQAINDAGVPTGPWQLLFEKEYAFATNTPQSISEKVEVPLARYQVRGYRTSDKPNDNREINTIQWAVMRGYAPSVRQYGDVTLLAMIIKATNNINQQTSRRINVIGTRKLPVWDPVNGWSVNPVATTNPAWAAADILRNTTYGRRLPTSRINIQELYRLSQVYQARGDEFNGVFDTTSQLWDALTKVLRVGRTVPINYAGLIDFVRNEPKTVPTYMFQPQNMVENSFSTEYAFAEPGSTPNYVQVEYINRETWVSETVDCVLPGVAPTIPAKVQLMGVTSRAQAWREGMSLAAANRDQRRQISFSTGFEGYLPRFGDLVQISHDVPQWGYSGEVLGLNAGPDSEEYGLQGELTTTEELVFVPGLTHQIAFKKRDGSPHGPFNVVPHPSGLYNKAIVQATVAQLQQIYISDGFREELTQYQFGPTERRGLRAVALSATPDSDGKVLLTFTNYAESVHAAENGGVTPPPGPDSNLPGIVTVPVIDSVKLELTPYAWQQLIVATPARGARLYEYEISQDGLNWSNLGTATSPSMQVNLSGGTWFVRVRAIGNLTGPWTTWTGVVEASTLPASRVDHVSITSVVFGIDLEWAVREDDYLAASVEVYWGTTNVLGNATRLIDMPLPGNKFSVTDLGPGAVRYFWFRAIDEAGRVGPWYNNGVGLMGKSSDQADIIMAYLDGKITETQLAQSLIEKIDSGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNDGVLESQVLVLADRFAVGRSDDATGTFKSMFIIDNGNVYIDTAFIKNGTITNAMIGNVLQSNNYVPGVSGWRIDKATNTIEINSPLPGGGRLTIDSQAVVVYDPNGIDRARFGWIP
Physico‐chemical
properties
protein length:1165 AA
molecular weight: 126842,85260 Da
isoelectric point:5,41990
aromaticity:0,09013
hydropathy:-0,15880

Domains

Domains [InterPro]
DC_0129
STR
1–1114
DC_0129 DC_2243
IPR055385
ATT
280–382
IPR055385 IPR032876 IPR015406
NF040662
Unmapped
280–770
NF040662 IPR053171
WNO48732.1
1 1165
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-279 | ATT 280-382 | STR 383-492 | ATT 493-641 | STR 642-1114 | RBD 1115-1164 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO48732.1
1 1165
Domain Start End Length (AA) Confidence
N-terminal 1 647 647 0,8253
Central domain 648 1113 467 0,0440
C-terminal 1114 1165 51 0,5355
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-647
Central
648-1113
C-terminal
1114-1165

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage nyaak_TL1
[NCBI] 		3043591 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter sp.
[NCBI] 		134375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO48732.1 [NCBI]
Genbank nucleotide accession
OQ817839.1 [NCBI]
CDS location
range 16917 -> 20414
strand +
CDS
ATGGCAACCCTGCTGCTGATTGAAAACGCTTTCCGCCCAGACGCGAATCCCCGGCAAGAGCCGGTCCGCGCCGGCGAGCGTATCAGCTCCATGCTGCGCCGTGTCGGCTACCTGAAGGGCCGCGGTGCGAAAGCGGTGCGTAAAGTCCCGTTCATCGTCGTTCGAAACGGCGAACCGGTCCTTATTGCCCAAATGTCTACGCGCATTAAGGCTAAGGACCATATCAGCGTCATTCACCTGCCAAAGGGCGGTGGTGGCGGGAGCAACCCGCTTCAAATGGTGTTGACGGTGGCTATTGCTGTCGCAGCCGCCTATACTGGCGGTTTGGCTGCTACGGCTTTTGGCTCCCAACTGGCCGGCGCGGCAGTGTCGGCTGCGGTCATGATTGGTGGCACTTTGCTGCTGAACATGTTCTTCCCGCCGCAAATGCCGTCAGCCATGTCCTTGAATCGAGAGAAGGCGAGCCCAACGTACTCGATTTCCTCTCAAGGCAACCAGGCCCGGCTTATGGAAGCTATCCCGGTCCTGTACGGCCGCTTCCGCACTTTCCCTGACCTCGCTTCGGCTCCTTATACCGAGTCGCGGGGCAACGAGACTTACCTGTACCAGCTCTTCTGCATCACGCAAGGGCAAATGGACATCGAGACCATCCAGGTCGAGAACGACAATGTGTCCACGTACGGGGAAATCGAGTACCAGGTTGTTAATCCTGGGCAGTCTGTTACCCTGTTCCCGGACAACGTCATTTCCAGCCCAGCCGTCAACAACTTTGAGCTTACTGCCCCAGACGAGCCTGGCAATATTAAGGGGCCTTTTGCGGTATCGAATCCTGGCGTTCAAGTCAACTATGTTGGCATTGACCTGTATTTGCCCGGTGGCGCGTACCGCATGAACGATAAGGGCCGATTCGAGACTTCCAAAGTCAATGTGAAGTTTGAATACCAAGCTATCAATGACGCAGGCGTTCCTACCGGCCCTTGGCAACTTCTTTTTGAGAAAGAGTACGCCTTTGCTACCAACACTCCTCAGAGTATTTCTGAGAAAGTTGAGGTTCCGCTTGCTCGGTATCAAGTACGAGGATATCGTACTAGTGACAAGCCAAATGACAACCGTGAAATCAATACGATTCAATGGGCTGTCATGCGTGGCTACGCTCCGTCGGTCCGCCAGTATGGTGACGTGACTTTGCTGGCCATGATTATCAAGGCCACAAACAACATCAACCAGCAAACCTCTCGTCGTATCAATGTGATTGGCACGCGTAAGCTGCCGGTGTGGGACCCTGTTAATGGTTGGTCTGTCAACCCAGTTGCTACGACTAACCCGGCTTGGGCTGCTGCAGACATCCTGCGCAATACGACCTATGGCCGACGTCTGCCAACTTCCCGCATCAACATTCAAGAGCTGTACCGCCTCTCGCAGGTCTATCAAGCTCGTGGTGATGAGTTCAATGGCGTCTTTGATACCACTTCTCAGTTGTGGGATGCGCTGACGAAAGTCTTGCGAGTGGGTCGGACTGTTCCGATCAACTACGCGGGCCTCATTGACTTTGTGCGCAACGAGCCCAAGACGGTTCCAACCTACATGTTCCAGCCTCAGAACATGGTGGAGAACTCGTTCAGCACTGAATACGCCTTTGCGGAGCCGGGCTCTACTCCGAACTATGTTCAAGTTGAGTATATCAACCGCGAAACTTGGGTGTCTGAGACTGTCGACTGCGTGCTCCCGGGCGTCGCTCCCACGATTCCGGCAAAGGTGCAGCTCATGGGCGTCACTAGCCGTGCTCAAGCTTGGCGTGAAGGTATGTCCTTGGCTGCCGCCAACCGCGATCAGCGCCGTCAAATCAGCTTCTCGACAGGCTTTGAGGGCTATTTGCCTCGCTTCGGCGACCTCGTCCAGATTTCTCACGACGTTCCTCAATGGGGATACTCTGGTGAAGTCTTGGGCTTGAACGCCGGACCGGACAGCGAAGAATATGGCTTGCAGGGTGAACTGACCACTACGGAAGAGCTGGTATTTGTTCCCGGACTGACCCACCAAATCGCGTTCAAGAAGCGCGATGGATCGCCGCATGGCCCCTTCAACGTTGTACCGCACCCCTCTGGTCTGTACAACAAGGCCATCGTCCAAGCCACTGTCGCCCAGCTGCAGCAAATCTACATTTCGGACGGTTTTCGGGAGGAGCTGACGCAGTATCAATTCGGTCCTACCGAACGCCGTGGGCTGCGTGCAGTCGCGTTGTCGGCTACTCCGGATAGCGACGGAAAAGTGCTGCTGACGTTCACGAACTACGCGGAGAGTGTCCATGCTGCTGAAAACGGGGGCGTTACTCCGCCTCCTGGCCCAGATTCGAATCTCCCGGGTATCGTCACGGTGCCCGTCATCGATTCGGTCAAGCTGGAGCTGACCCCGTATGCTTGGCAGCAATTGATCGTGGCTACTCCTGCCCGTGGTGCCCGCTTGTATGAGTATGAGATTAGCCAGGACGGCCTCAATTGGTCCAACCTCGGCACGGCTACGTCTCCTTCGATGCAAGTCAACCTCAGTGGCGGCACCTGGTTTGTCCGAGTGCGTGCTATCGGCAACCTGACTGGCCCTTGGACTACTTGGACGGGCGTCGTTGAGGCGTCTACGCTTCCAGCTTCCCGCGTCGACCACGTTTCCATTACGTCGGTTGTGTTTGGTATCGACCTCGAATGGGCCGTGCGTGAAGATGACTATCTGGCTGCGTCCGTTGAGGTGTACTGGGGAACTACCAACGTGCTCGGCAATGCCACCAGGCTCATTGACATGCCACTGCCAGGGAATAAATTCTCTGTCACGGACCTCGGGCCTGGTGCTGTTCGGTACTTCTGGTTCCGAGCGATTGACGAAGCAGGGCGCGTCGGTCCTTGGTACAACAACGGCGTGGGTCTGATGGGCAAGTCCAGCGATCAAGCTGACATTATCATGGCCTATCTGGACGGCAAGATCACTGAGACCCAACTGGCTCAATCCCTTATCGAGAAGATCGATTCTGGTGGCGGAGCTGCAGTCGAGGTGGAGGCAATCCAAAACGCCTTGGCCGCAATGTATACCATCAAAACGCAGTTGACGGCTGGTGGCCGCACAGCTCTTGCTGGTATCGGTGTTGGTGTCGAAAACAACGACGGTGTGCTAGAATCACAAGTACTTGTGTTGGCAGACCGATTTGCGGTGGGTCGTTCTGATGATGCTACTGGAACTTTCAAGTCCATGTTCATCATCGACAACGGCAACGTGTACATCGACACTGCCTTCATCAAGAACGGCACCATTACGAACGCAATGATTGGAAACGTGCTTCAATCCAATAACTACGTTCCTGGTGTTTCTGGCTGGCGCATTGATAAAGCTACCAACACCATTGAAATTAACAGCCCGCTGCCCGGAGGCGGACGTCTTACTATCGACTCTCAAGCGGTAGTTGTGTATGACCCCAATGGGATTGACCGGGCACGCTTTGGATGGATTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
062d380dd21226e9c0d948dfa8f2db34e8c8a9d4243939ffa347a549e7b26b26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Compounding Achromophages for therapeutic applications Cobian-Guemes,A.G., Le,T., Rojas,M.I., Villela,H., McNair,K., Hung,S.-H., Han,L., Boling,L., Octavio,J.C., Dominguez,L., Cantu,V.A., Archdeacon,S., Vega,A.A., Jacobson,N., An,M., Hajama,H., Burkeen,G., Edwards,R.A., Conrad,D., Rohwer,F. and Segall,A.M. 2006 — GenBank