Protein

View in Explore
Genbank accession
YP_010741446.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTIIYDVTGHKGGGGKQHTPQETPDSLHSLAKIRILLALXEGEFESITSASELRQRVYLDGTPIQNADLSENFPGARVEFRPGTQHQDVIHGFSAVESEQSVGVKLENGTPWVRQINDTSLDAVRIRVGIPALYTNEDNGDLVGGRIDYKIVVYTDNADPREFNFAAVGKTMSLYERDHRIELPPNVNTGWRVEVHRTTADSTSAKVVNDIRVQSITEIIDARLRYPQTALLFVEFDAKAFQNIPRVSIKCKGRKVLVPNNYDPINHTYSGDWDGTFKRAWTDNPAWHWYDICITERFGLGRRIKPQMLNRYALYQIAKRCDQLVSDGNGGQEIRFKNDMYIQSQTDAWTVLKDLAAIFAGMTWWGNQMLNIVSDQPVAAVSHTITNASVIDGRFDYASGSQKTRYSTFAVAYGNPKNHYDDAIATGQRVELVRRHKINRLDITAIGCTRESEAQRRGHWALISNQLDQQVSFKVGMEGLFFIPGSVVAIADTNISGGFETRGGRLLSDPGTRTVLNTDSEITFRPGDKFLVRTDSGNVETREIASVNGNKVTLKTALDADPIPDQPFCVDGDDIQLQKFRITDLEYDDSTSTFSVRGIEYNDSKYDAVDNGARLDPGIFTQVPDGVMKGPESVTITPSQISSQGQLITNVDIVFPPVKDAVVYEIQWRRTSLQNMAVQWGNDWVNIPRTASNGAHIPNVFSGNYQARVRAIGMGEISSPWVSSAITPVEGRLGGLNAPIITNAISGLHQILWKWSHNNAATDISYTELEVRKTGETEWKFLTNVPYPGSEYAQTSLEFGIYQQLRARVADKIGNLSDWSAPFEGQVSDKVDEYMKGLDDAFLTSEDGKHFQEAIDTIPQGIYESMLTDAQQLFNARAEYKGIYAEITVAYNVAADAHKAVAQLETLIGTRLDDAEASIHTLQTAQSTHEQAFAQYQQTVAAKFGEQESAIQQVQTATADVAGALAEYKTHVAAQFDQQSAAIEQKMTSTFNHAGGSATYSLKAGVTYNGTYYDAGMQLSVVAEGGAVKSRIAFKADQFYIMHPSNGSLSSAFIVDGGQVYIDTARIKNASINFAQITDTLQSNNYDGYSRGWRLGKDGTFINLGTGNGGGMKQTNTQISVRDGNGVLRVQIGEITGYW
Physico‐chemical
properties
protein length:1139 AA
molecular weight: 125679,61520 Da
isoelectric point:5,36886
aromaticity:0,09139
hydropathy:-0,38409

Domains

Domains [InterPro]
DC_0014
STR
1–1139
DC_0014
IPR053171
Unmapped
7–857
IPR053171 IPR015406
IPR055385
ATT
96–222
IPR055385 IPR032876 IPR036116
YP_010741446.1
1 1139
Architecture
STR
ATT
STR
ATT
STR
STR 1-95 | ATT 96-222 | STR 223-343 | ATT 344-495 | STR 496-1139
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010741446.1
1 1139
Domain Start End Length (AA) Confidence
N-terminal 1 513 513 0,9099
Central domain 514 1080 568 0,0378
C-terminal 1081 1139 58 0,9005
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-513
Central
514-1080
C-terminal
1081-1139

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CEC_Kaz_2018
[NCBI] 		2565596 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010741446.1 [NCBI]
Genbank nucleotide accession
NC_073070 [NCBI]
CDS location
range 11596 -> 15015
strand -
CDS
ATGACGATTATCTACGACGTCACAGGGCATAAAGGCGGCGGCGGCAAACAGCACACCCCGCAGGAAACGCCGGATAGCCTGCATTCCCTGGCTAAAATCCGCATCTTGCTTGCGCTAKGGGAAGGGGAATTCGAAAGTATTACCAGCGCCAGCGAATTGCGGCAGCGTGTATACCTGGACGGCACGCCGATCCAGAACGCCGACCTGTCTGAAAACTTCCCAGGCGCGCGCGTGGAGTTCCGCCCCGGTACACAGCACCAGGATGTGATCCACGGATTTTCAGCGGTGGAAAGTGAGCAATCCGTCGGCGTAAAACTGGAAAACGGCACGCCGTGGGTGCGCCAGATTAACGACACCAGTCTTGACGCCGTGCGCATTCGTGTTGGTATCCCGGCCCTGTACACCAACGAAGATAATGGCGACCTGGTGGGCGGGCGCATCGACTATAAAATCGTTGTGTACACAGATAACGCCGACCCGCGCGAGTTCAACTTCGCTGCCGTTGGTAAAACAATGTCGCTGTATGAGCGCGACCACCGCATCGAATTACCGCCGAACGTGAACACCGGCTGGCGCGTGGAAGTGCACCGCACAACGGCAGATTCCACATCGGCGAAAGTGGTGAACGATATCCGGGTGCAATCAATCACTGAGATTATCGACGCCCGCCTGCGCTACCCGCAAACCGCGCTGTTGTTCGTGGAGTTCGACGCTAAAGCGTTCCAGAACATCCCGCGCGTATCCATTAAGTGCAAAGGCCGCAAAGTGCTGGTCCCGAACAACTACGATCCGATCAACCATACCTATTCGGGCGACTGGGATGGCACGTTTAAACGCGCGTGGACGGATAACCCTGCGTGGCACTGGTACGATATTTGTATTACGGAGCGCTTCGGCCTCGGTCGCCGGATCAAACCGCAAATGCTGAACCGGTACGCGCTCTACCAGATTGCGAAGCGCTGCGATCAACTGGTCAGCGACGGCAACGGCGGGCAGGAAATACGATTTAAGAATGATATGTACATCCAGTCGCAGACAGACGCCTGGACCGTGCTTAAGGATTTAGCAGCTATCTTTGCCGGTATGACCTGGTGGGGCAACCAGATGTTGAATATCGTAAGTGACCAGCCGGTCGCAGCGGTATCGCACACTATCACCAACGCCTCGGTTATTGATGGCAGATTCGACTACGCGTCAGGGAGCCAGAAAACTCGCTATTCCACGTTCGCGGTAGCATACGGCAACCCTAAGAACCACTACGACGATGCCATCGCAACGGGACAGCGTGTCGAACTGGTACGCCGCCATAAGATTAACCGTCTGGATATTACGGCGATCGGCTGTACGCGTGAATCAGAAGCGCAACGCCGGGGGCACTGGGCGCTAATCTCCAACCAGCTTGACCAGCAAGTTAGCTTTAAGGTTGGCATGGAAGGACTATTCTTTATTCCTGGTAGTGTAGTCGCGATCGCCGATACAAACATTTCTGGCGGCTTCGAGACACGCGGCGGTCGCCTGTTGTCGGACCCCGGCACGCGTACCGTGCTTAACACGGACAGCGAAATCACGTTCCGCCCAGGTGATAAATTCCTGGTACGCACCGATAGCGGTAATGTGGAGACTCGCGAGATCGCCAGCGTCAACGGCAACAAGGTTACGCTAAAAACCGCACTGGACGCCGACCCGATTCCAGACCAGCCGTTTTGCGTTGATGGCGACGATATCCAGTTGCAGAAGTTCCGCATAACCGACCTGGAATATGACGACTCTACCAGCACTTTTTCGGTGCGCGGGATCGAGTACAACGACAGCAAGTATGATGCCGTTGATAATGGCGCGCGCCTTGATCCGGGTATCTTCACGCAAGTGCCAGACGGTGTAATGAAGGGGCCAGAGTCCGTGACCATCACTCCGTCGCAGATTTCATCGCAAGGCCAGCTAATCACCAACGTGGATATTGTTTTCCCGCCGGTGAAAGATGCCGTGGTGTATGAAATACAGTGGCGACGCACCAGCTTGCAGAATATGGCGGTCCAGTGGGGAAACGACTGGGTAAACATCCCACGCACGGCATCGAACGGCGCTCACATCCCTAACGTGTTCTCCGGTAACTACCAGGCACGCGTCCGCGCGATCGGTATGGGCGAGATTTCGTCCCCGTGGGTGTCGTCCGCTATCACGCCGGTGGAAGGTCGTCTCGGCGGTCTTAACGCGCCTATCATCACCAACGCGATTTCGGGCCTCCACCAAATTTTGTGGAAGTGGAGCCACAACAACGCCGCGACGGATATTTCGTACACCGAGCTTGAGGTCCGCAAGACGGGTGAAACGGAATGGAAGTTCCTAACCAACGTCCCATACCCCGGGTCGGAGTATGCGCAAACGTCGCTGGAGTTCGGCATCTATCAGCAGTTGCGCGCCCGTGTCGCGGATAAAATCGGCAACCTGTCGGACTGGTCGGCCCCGTTTGAGGGGCAGGTGAGTGACAAAGTTGACGAGTATATGAAGGGGCTTGATGACGCGTTCTTGACTTCCGAGGATGGTAAACACTTCCAGGAAGCAATAGACACGATCCCGCAAGGCATCTATGAGTCTATGCTAACGGACGCCCAGCAGCTATTCAACGCCCGCGCAGAGTATAAAGGGATTTATGCGGAAATAACGGTGGCATATAACGTGGCGGCGGACGCCCACAAGGCGGTCGCGCAACTTGAGACGTTGATCGGCACTCGTCTTGACGATGCAGAAGCGTCGATCCACACGTTGCAGACCGCGCAAAGCACGCATGAACAAGCGTTCGCCCAGTATCAACAAACGGTTGCCGCTAAGTTCGGGGAGCAGGAATCAGCCATCCAGCAGGTACAAACGGCAACGGCAGACGTGGCTGGCGCGCTGGCAGAGTACAAGACCCATGTAGCGGCACAGTTCGACCAACAGTCCGCGGCTATTGAGCAGAAGATGACGTCAACGTTTAACCACGCTGGTGGTAGCGCCACCTACAGCCTTAAGGCGGGCGTGACGTATAACGGGACTTACTATGACGCTGGTATGCAGCTTTCAGTTGTGGCAGAAGGCGGCGCGGTTAAATCACGCATCGCATTCAAGGCGGACCAGTTCTACATCATGCACCCATCTAACGGGTCGCTTTCGTCCGCGTTTATTGTAGACGGCGGGCAGGTGTATATTGACACGGCCCGCATCAAGAACGCGTCAATCAACTTTGCGCAGATTACAGACACGCTCCAATCCAACAACTATGACGGTTACTCGCGTGGTTGGCGCTTAGGGAAAGACGGAACGTTTATCAACCTGGGAACCGGTAACGGTGGCGGGATGAAACAGACAAACACGCAAATCAGCGTTAGGGACGGAAACGGCGTGCTCCGCGTGCAAATTGGTGAAATCACAGGTTATTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8edcdb9ba82c886674320874289952c961b0c495e7498d40494f7cb5f75891ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7823
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis and characterization of phage CEC_Kaz_2018 infecting multidrug resistant Escherichia coli isolated from chicken Bogoyavlenskiy,A., Alexyuk,M., Alexyuk,P., Moldakhanov,Y., Turmagambetova,A. and Berezin,V. 2025-01-17 — GenBank