Protein

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Genbank accession
AUR81286.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQVSAAINGVRVTPPSQTDLMIESFKENIGELANHLRAMDNDTTSIVEYFASDSYVREMVIPAGTCVIGRVHKTDCINILLEGDIVIVDNDGNRKEMKAPKVFIAKAGHQKAGFALTDTRWLNCFSCKEEQLSDVVNHFTVETEEEYMRLLENKL
Physico‐chemical
properties
protein length:155 AA
molecular weight: 17395,64250 Da
isoelectric point:4,96900
aromaticity:0,06452
hydropathy:-0,20710

Domains

Domains [InterPro]
DC_0531
STR
12–155
DC_0531
IPR011051
Unmapped
32–126
IPR011051
AUR81286.1
1 155
Architecture
STR
STR 12-155
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.003.O._10N.286.48.A2
[NCBI] 		1881287 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR81286.1 [NCBI]
Genbank nucleotide accession
MG592390.1 [NCBI]
CDS location
range 10581 -> 11048
strand +
CDS
ATGCAAGTGTCGGCGGCAATTAATGGCGTGAGAGTTACACCACCTTCTCAAACAGATTTGATGATAGAGAGCTTTAAAGAAAATATTGGAGAGCTTGCTAATCACTTAAGGGCAATGGATAACGATACAACATCCATTGTTGAGTATTTTGCGTCCGACTCTTACGTTAGAGAAATGGTGATACCTGCCGGAACTTGCGTTATAGGCAGGGTTCACAAGACCGACTGTATAAACATTCTGCTAGAAGGTGACATTGTAATTGTTGATAACGATGGAAATCGTAAAGAAATGAAAGCGCCGAAAGTGTTTATCGCTAAAGCTGGACACCAAAAAGCAGGGTTTGCACTTACTGATACTAGGTGGTTAAACTGCTTCTCGTGCAAGGAGGAGCAGCTTTCCGATGTTGTTAATCACTTCACCGTAGAGACAGAGGAAGAGTACATGAGATTGCTGGAGAATAAATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8aae613dc5d17c26cbcfee2d497171afa22eb30877d526d201f478b55c3b6742
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7880
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank