Protein

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Genbank accession
AWD91436.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDSGNIIDLGIAKGGQIDGNVTIDGTLRVNGPINNFGNFSTSGTITASNIVSATVFRSTSGSFYTRAINDTANAHLWFENTNGSERGVLYSKPQSENEGVITMRVRQGTAAGAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKAFGQYDSQSLVQYVYPGTGETNGVNYLRKVRAKSGGTMWHELCTAQTGQADEMSWWTGNTPSSKQYGIRNDGRMAGRNSLALGTFTTNFPSSDYGNVGVMGDKYLVLGDTVTGLSYKKTGVFDLVGGGYSVASITPDSFRSTRKGIFGRSEDQGTTWIMPGTNAAFLSVQTQADNNNAGDGQTHIGYNAGGKMSHYFRGKGKTNINTQEGVDVNPGILKLTTGGESISFNAATGSINSTLAFRLNKGIIIDGPDNQGFQFNAPTAADGTRSIYWNSGTRAGQNKSPVTVKAWGNSFNASGDRNRETVFEVSDGQGYHFYSQRVAPAPGSTVGPIQLRVNGGLLTSGGITASGSIVTESSLVANNGMSINGQAKFGGTADALRIWNAEYGAIFRRSETNFYIIPTPKDAGESGGISNLRPFTINLANGSVMMGNHTQAGKNLLTIDNVSKFVQTDVRLRVNMDSDGIVLNASSQAASNFIQGRKADVTKWYLGIGDGGNVVRMHNYTYSHGIALNSDTVDITKPLKINNIRIGTDGNITGGTGNFANLNTTLNNKVDVGGWSGGATTGWYKFATVNIPQSTGTVAFKIYGGSGFNFKSYGQASVAEIILRTGNNNPKGLNATLWNRTSEAFSQIATVNTSNDTYDVYVYVGGYSNALVIEYSCTSNSTVTVVGLNGGIQPIVETLPEGHVVGKTVRLLNNIDGMFAAGESDVVTRGEFVTNNQKGLRIKSRGNDIDSNAAIIRNDGGSFYILATDKNTSEKPNAASGDWNNLRPFSINMADGRVGMNHGLNITGGGLNVTGGLNVTSGNTSLGNISSRVVAGWRGASGWADNSDTMKSKITFMADHGDLSNSGSYYPIVGAYSNYGSAGYRQTFEFGWVGSGTTAGWRDGIIRIRGDNANGQQARWRFTMDGTLDCPGKVLLPQTGAFGVNTSNGLGGNSITFGDNDTGIKQNGDGLLDIYANSVQVFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGVIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDRKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1282 AA
molecular weight: 136580,99090 Da
isoelectric point:8,80588
aromaticity:0,08502
hydropathy:-0,33534

Domains

Domains [InterPro]
DC_1954
STR
1–1281
DC_1954
IPR048390
ATT
492–617
IPR048390 IPR048388 IPR030392 Coil
G3DSA:6.20.80.10
STR
660–717
G3DSA:6.20.80.10 IPR030392
AWD91436.1
1 1282
Architecture
STR
ATT
STR
ATT
STR
STR 1-491 | ATT 492-617 | STR 618-659 | ATT 660-734 | STR 735-1281 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWD91436.1
1 1282
Domain Start End Length (AA) Confidence
N-terminal 1 725 725 0,0434
Central domain 726 936 212 0,7623
C-terminal 937 1282 345 0,8114
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-725
Central
726-936
C-terminal
937-1282

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoM_IME339
[NCBI] 		2163889 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
5f6744fb15cd388a59edb0db3c7a228d941128b642f3fb3d709ef57507638ecd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5252
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50