Protein

View in Explore
Genbank accession
QUE39227.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MNLSFEMSGSGWGSLPAVTNIFDYTRAWSTGKIVVDLGQITESSTCVMGLRGGSKYDVTLHVDTNPAAINVYQTDYTGPNGRVFPVRTDGTEPVRTYGYYSEIKQTQESISATVAKVDDQGRRLSAAELTLSADHAKLSVVETTANNANSLAGTANNKAEAADGRVTATQNGLVETGINITSRKIVLKSDNVLFQNNAGQQTAALNANGKLTANSIEVGEVVARGFAAQRITTGNLTVTDGAVIGGMTITGGVLTGKNINIQDGAKIGSFTIVSGIFSAQNTPAGIQMTLSNNAATFDSSGVRVEHNSGGYALTTTGNGRIFLTGSNFWVQCKDVDFMGAQKWKAPGVFYACTILANGAIGKTWGNPDFHITRVTKNSTGRYTVNTTGSNGDYFVMITAYDSTSWLSTTVEPYSEGQFTYKVFDVNHGMRDGGVIIYFCGMVR
Physico‐chemical
properties
protein length:443 AA
molecular weight: 47035,94020 Da
isoelectric point:6,53264
aromaticity:0,08578
hydropathy:-0,15666

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QUE39227.1
1 443
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3824
Central domain 11 253 244 0,3475
C-terminal 254 443 189 0,7687
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-253
C-terminal
254-443

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage GEC_vB_Bfr_VA7
[NCBI] 		2829146 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides fragilis
[NCBI] 		817 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QUE39227.1 [NCBI]
Genbank nucleotide accession
MW916539.1 [NCBI]
CDS location
range 9259 -> 10590
strand -
CDS
ATGAACTTGTCATTTGAAATGTCGGGTTCGGGATGGGGTTCTTTGCCTGCCGTAACAAACATATTCGACTATACACGTGCGTGGAGTACAGGGAAGATAGTTGTAGATTTGGGACAGATAACCGAATCATCTACTTGCGTAATGGGGCTTCGTGGGGGTTCAAAATACGATGTAACATTACACGTAGATACAAACCCTGCCGCAATCAACGTATACCAAACTGATTATACCGGACCAAACGGTCGAGTATTTCCCGTCCGCACCGATGGTACAGAGCCAGTCCGGACGTATGGTTACTACTCTGAAATAAAACAGACACAAGAAAGTATCTCCGCAACGGTTGCAAAGGTAGACGATCAAGGCAGACGATTAAGTGCGGCTGAGTTAACATTATCTGCCGATCACGCAAAATTATCGGTAGTAGAAACGACTGCAAACAATGCCAACTCGCTTGCCGGAACTGCAAACAACAAAGCAGAAGCGGCAGACGGTCGAGTCACCGCCACGCAGAACGGTTTAGTCGAGACGGGTATCAATATCACGTCCCGCAAAATCGTGCTAAAGTCTGATAACGTCCTTTTCCAAAACAACGCAGGGCAGCAGACGGCAGCACTTAATGCGAACGGAAAACTTACTGCAAACTCCATTGAAGTTGGCGAAGTCGTTGCCAGAGGTTTTGCGGCTCAGAGAATCACTACCGGAAACTTGACTGTGACGGATGGGGCGGTTATCGGGGGAATGACTATTACAGGGGGAGTGTTGACCGGGAAGAACATCAATATTCAAGATGGCGCAAAGATCGGTAGCTTCACCATTGTATCGGGTATATTTTCCGCCCAAAATACGCCCGCAGGCATACAAATGACTCTATCTAATAATGCAGCTACTTTTGACAGTAGCGGAGTACGTGTAGAACATAATTCGGGTGGTTATGCGTTGACTACTACGGGTAACGGAAGAATATTCCTAACAGGATCAAATTTTTGGGTTCAGTGCAAGGATGTTGATTTTATGGGTGCTCAAAAATGGAAAGCCCCGGGTGTTTTTTACGCATGTACGATTTTGGCAAACGGAGCAATCGGTAAAACATGGGGGAACCCTGACTTTCACATAACAAGAGTAACTAAAAACTCAACAGGGAGATATACTGTTAATACTACCGGTTCTAATGGGGACTACTTTGTTATGATTACAGCGTATGACTCTACAAGCTGGCTAAGTACAACAGTAGAACCATACTCAGAGGGACAGTTTACGTACAAAGTATTCGATGTAAATCATGGCATGCGTGACGGCGGAGTTATTATTTATTTTTGTGGAATGGTTAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
bc6c8e0ad9a33ad1842c762961523739ad6fa95309d6edb8396f897b2b587f1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6481
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
SELECTION OF THE ACTIVE PHAGES AGAINST B.FRAGILIS FOR FURTHER STUDY OF THRAPEUTIC PERPECTIVES Bakuradze,N., Makalatia,K., Merabishvili,M., Togoshvili,L. and Chanishvili,N. 2018 30702082 GenBank