Protein

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Genbank accession
VUE36577.1 [GenBank]
Protein name
X-linked retinitis pigmentosa GTPase regulator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFSIISHYGNIIIKSQIKKIVSSYQTIALLYSNGNLYMRGTNQLRAFGIDHASDSLNWVLVKTGVDDVWVGPTHTIIRTSTGEYQCAGYFRPLGYDDSPQGKLWVRYDKLYTLTSTPETTVKQICCGSNSTFILLTNGILYGIGFNNQYWLGADSTYRTTYTQSLSNVRSVHHNTNASFAITNDNKLYGTGNSVNGKLGTNMNTIQQGWTEIALPSPYTYPIQAKEHPTHSLLYASTDSTMQDTRILFCGNTSANPGGRIPAWPNNTVFVFTIGNGGQNGSVQDFATGIVQTVSQTLKSFYYNNSSLYGAGLAGYQMGSSTDRSTGFSTFNLGTEIGSISSAHVVNGCTFILSNNTVYGCGTSTWLGINTYDFIIVSTPE
Physico‐chemical
properties
protein length:382 AA
molecular weight: 41730,10200 Da
isoelectric point:7,62009
aromaticity:0,11780
hydropathy:-0,18482

Domains

Domains [InterPro]
IPR009091
STR
11–261
IPR009091
IPR009091
STR
15–368
IPR009091
IPR009091
STR
20–261
IPR009091
IPR051553
Unmapped
65–286
IPR051553
PF13540
STR
123–149
PF13540 DC_1781
VUE36577.1
1 382
Architecture
STR
RBD
STR 11-368 | RBD 369-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VUE36577.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 290 290 0,0601
Central domain 291 371 82 0,2850
C-terminal 372 382 10 0,9154
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-290
Central
291-371
C-terminal
372-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fHe-Yen9-04
[NCBI] 		2052742 Uroviricota > Caudoviricetes > Eneladusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VUE36577.1 [NCBI]
Genbank nucleotide accession
LR596615 [NCBI]
CDS location
range 352107 -> 353255
strand -
CDS
ATGTTACCATTTTCAATTATTAGTCATTATGGTAATATAATAATAAAGTCACAGATAAAGAAGATAGTATCTTCATATCAGACGATAGCATTATTATACAGTAATGGTAATTTATACATGAGGGGAACGAATCAACTGAGGGCATTTGGAATAGATCATGCATCTGACAGTTTGAATTGGGTATTAGTCAAGACAGGAGTAGATGATGTATGGGTTGGTCCTACACATACAATAATAAGGACAAGTACAGGAGAATATCAATGTGCAGGATATTTTAGGCCATTAGGATATGATGATAGTCCACAAGGAAAGTTATGGGTTAGGTATGATAAGTTATATACATTAACGAGTACTCCTGAGACTACGGTAAAGCAGATATGTTGTGGATCGAATTCAACATTTATATTATTAACTAATGGTATATTATATGGTATAGGGTTTAACAATCAGTACTGGTTAGGAGCTGATTCTACCTATAGGACTACATACACACAATCATTAAGTAATGTACGGTCAGTACATCATAATACGAACGCTTCATTTGCTATAACGAATGACAATAAGTTATATGGTACAGGGAACAGTGTTAATGGTAAGTTAGGGACGAATATGAATACTATTCAACAAGGCTGGACAGAGATAGCATTACCATCTCCTTATACATATCCTATACAAGCGAAGGAGCATCCTACACATAGTTTACTATATGCTAGTACTGACAGTACGATGCAGGATACAAGGATATTATTTTGTGGCAATACTAGTGCGAATCCTGGGGGAAGAATCCCTGCATGGCCTAATAACACAGTATTTGTTTTCACCATAGGTAATGGTGGTCAAAATGGTTCAGTACAAGATTTTGCGACAGGTATAGTTCAGACTGTATCACAGACATTAAAATCTTTTTACTATAACAACAGTTCTTTATATGGGGCGGGTCTGGCTGGATATCAGATGGGTAGTAGTACTGATAGGAGTACTGGATTTAGTACATTCAATTTAGGAACAGAAATAGGTTCAATAAGTTCAGCCCATGTAGTAAATGGTTGTACATTTATATTAAGCAATAACACAGTATATGGATGTGGTACTAGCACATGGTTAGGAATAAACACATATGATTTTATTATAGTAAGCACACCAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
501e42d901ba351d0aa65de67c5bda466ec1e0ef55f403162354f430d129a111
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50