Protein

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Genbank accession
YP_010110528.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFNTTNGKIHTQTFLGGMNKDLDASVLPSDSYRNSTNIRITKINDKKGTIQFIPGVEQSYDFGESKFLSYVGGTVIRNYALFIFYHTTERVNYFYRYDNNETEEENRVKLIGKGPLGITANYKLSFVSRWEDDDNVKVYWADGVHQIRYLNILQNDKVFGPTDLDQVPDISVNKPEFVGYGIGQLNSGKIQYAYQFFNKNGVETQISPLSDMIYLTKYSDGSKDTDIQGTSEDENSEASVILNINLNENTFEYVKIYSIYYKNNKDLPVVNVIYQGKLNKSQGNFTYEDFGTSRIKEITIEEFNYISGFKLTPKILATKDNYLFAANVKDSTWDIDFDARAYRFSRIKSTLLKAYFDPDNSDIDTNEIYYYVSTLRDSGNNRNYIVVKGSDFKSGNVNCVIRKSSTKTEEIDKTHDCINPYNSYIGIRNVELGNSDNLNIDEYVETLNNEIDINLATTDRNAFNNKVEGLLNICVYGYVDTSDTQDVYRFGAIGNNVSFRTITSELAGYSNGKIPVLNSTSTASEKEIHYFDGFNEKTLYDSSTWDYSDAKRGSSVINNIIPKSYINTKIDGKLKSYQRDEIYRLGCVLYNSSGEKSTVKWICDMKMPKDADSFSEIFTYSGNINSNGTVKCKPLGLLFNFRNLPSEVTKVEIVRCERTANDRSILAQGIVGKVFKYDTNKTNLVSIRPTNFPSMCDSYSTIAMNGNVFDVAEPDNEDGLTTWFNTKFGYVNKTENELDDYFIFASPEISVNGKAFYDQIKNKSLYLQTLYTVTSTLGKTVDYVIRANTNIIEDNIYGVALAKNLGTTANPQDETIIDEDKTLPNDPGTNISYRKDTGCYGIYYTKDSTKLLYVTGTYDNIDSPETVSSRVRYYRDTLAFTYYYKNYIPHVSWNNVNNTGHAHNIIGNKSEIIDFKYTKVIDLLSYSGQSEDTLALDNMIQIGDNKYLNQYDTLFTNASLNNTNFVYNSKWGPHGACFIVNTNAGIINRGDSVTDKFYVNGINSIGEGDLIPKVISISSTVMVNLRTNVTPYGGNSYNVRENSTYVSTGYIIDVDNNKIEDIPVFGGDTYINIFEWLSGYVNPTERSVRQRTMTVCYFPVETSINTGLIQEPEFRREQNRYINFYASDAYFNYTQAYQEYRYNNAYSANSTISQNVSSHEFDETNKTFDCRVYGSDPKTNDETSDSWLHFRPADYIEVDTKYGPINGLNVFNNRLFFLQEKAFGTISVNERSLIQDNNPGQLVLGTGDKLQRYDYISERYGIRNEDTYTIVNSTNSFYWLDYLNKAILRFSENLSILSLEKNISTYLNTISLDNSVSISNAVSDNMNNEIYFTIDENTNDTLVYNEELGKFTSFYSFSPESYFNFNTQLYSFKNNKLYLHNKVTNDNKIYDELPIYSLDFIANKDIQNIKVFDTITYPACDLIKPDNGIECIKCDTLNQTTGIVEPKIDNRETEYFVTIPRDNSKIKFGNRLRGKYMKCNITFKNINDFSLPYLNVLYRYSNI
Physico‐chemical
properties
protein length:1503 AA
molecular weight: 171884,77150 Da
isoelectric point:4,98651
aromaticity:0,13041
hydropathy:-0,52974

Domains

Domains [InterPro]
IPR057889
STR
9–1375
IPR057889 IPR057888
DC_1659
RBD
1357–1503
DC_1659
YP_010110528.1
1 1503
Architecture
STR
RBD
STR 9-1375 | RBD 1376-1503
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010110528.1
1 1503
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,8737
Central domain 312 569 259 0,9017
C-terminal 570 1503 933 0,1299
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-569
C-terminal
570-1503

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr118_1
[NCBI] 		2772063 Uroviricota > Caudoviricetes > Crassvirales > Uncouvirinae > Besingivirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010110528.1 [NCBI]
Genbank nucleotide accession
NC_055872 [NCBI]
CDS location
range 7946 -> 12457
strand +
CDS
ATGTTTAATACTACTAATGGTAAAATTCATACCCAAACATTTTTGGGCGGTATGAATAAAGATTTAGACGCAAGTGTATTACCTAGTGATTCTTATAGAAATTCAACTAATATTCGTATTACTAAAATTAACGATAAGAAAGGTACTATACAATTTATACCTGGTGTAGAACAAAGTTACGATTTTGGTGAGAGTAAGTTTTTATCATATGTAGGTGGTACTGTAATTAGAAATTACGCCTTATTTATTTTCTATCATACTACAGAAAGGGTAAACTATTTTTATAGATACGATAACAATGAAACTGAAGAAGAAAATAGGGTAAAGCTGATAGGTAAAGGTCCGTTAGGTATAACTGCAAATTACAAGTTATCGTTTGTATCAAGATGGGAAGACGACGATAATGTAAAAGTTTATTGGGCTGATGGAGTACATCAAATAAGATACTTAAACATACTACAAAACGATAAAGTATTTGGTCCTACTGATTTAGATCAAGTACCAGATATTTCAGTAAATAAACCAGAATTTGTTGGTTATGGTATAGGTCAATTAAATTCAGGTAAAATACAGTATGCATATCAGTTTTTCAATAAAAATGGTGTAGAAACACAAATATCACCATTAAGTGATATGATATATCTTACTAAATATTCAGACGGTAGTAAAGATACTGATATACAAGGTACATCAGAAGATGAAAATTCGGAAGCATCAGTTATTTTAAATATAAATCTTAATGAAAATACATTTGAATATGTAAAAATTTACTCCATTTACTATAAAAATAATAAAGATCTACCAGTAGTAAATGTAATTTATCAAGGTAAACTAAATAAATCACAAGGTAATTTTACATATGAAGATTTTGGTACATCACGAATAAAAGAAATAACAATAGAGGAATTCAACTACATATCTGGCTTTAAATTAACACCGAAAATATTAGCGACTAAAGATAATTATTTATTTGCTGCAAACGTAAAAGATAGTACTTGGGATATAGATTTTGACGCTAGAGCATATAGATTCTCAAGAATAAAGTCTACATTACTAAAAGCGTATTTTGATCCCGATAATAGTGATATAGATACGAATGAAATATATTACTATGTATCCACATTGAGAGATAGTGGTAATAATAGAAACTATATAGTAGTAAAAGGTAGTGATTTTAAATCCGGTAATGTTAATTGTGTTATACGAAAAAGTAGCACGAAAACAGAAGAAATAGATAAAACACACGATTGTATAAATCCATATAATAGTTATATCGGTATTAGAAATGTAGAATTAGGTAATTCAGATAATCTTAATATAGATGAATACGTAGAAACACTAAATAATGAAATAGATATAAATCTAGCTACTACAGATAGAAATGCATTTAACAATAAAGTAGAAGGTTTACTTAATATATGTGTATACGGATATGTAGATACTAGTGATACTCAAGATGTCTATAGATTTGGTGCAATTGGTAATAACGTATCATTTAGAACGATAACATCAGAATTAGCTGGTTATTCTAATGGTAAAATTCCAGTATTAAATTCTACAAGTACAGCCAGTGAAAAAGAAATACATTACTTTGATGGATTTAATGAAAAAACATTATACGATTCATCTACTTGGGATTATAGTGACGCTAAACGCGGATCATCCGTTATAAACAATATTATACCAAAATCGTATATAAATACAAAAATAGATGGTAAATTAAAGAGTTATCAACGGGATGAAATATACAGATTAGGTTGCGTATTATATAATTCATCAGGTGAAAAATCCACAGTAAAATGGATATGTGATATGAAAATGCCGAAAGATGCAGATTCTTTTAGTGAAATATTTACGTATTCAGGCAATATAAATTCTAACGGCACTGTAAAATGCAAACCGTTAGGATTACTATTTAATTTTAGAAATTTACCATCAGAAGTAACAAAAGTAGAGATAGTACGATGTGAACGTACAGCTAACGATAGATCTATATTAGCACAAGGTATAGTAGGTAAAGTATTTAAATATGATACAAACAAAACTAATTTAGTATCAATAAGACCTACTAATTTTCCTAGTATGTGTGATAGTTATTCTACCATAGCTATGAATGGTAATGTATTCGATGTTGCTGAACCTGATAATGAAGATGGATTAACTACTTGGTTTAATACTAAATTTGGTTATGTAAATAAAACAGAAAATGAATTAGATGACTATTTTATATTTGCTAGTCCTGAAATATCAGTAAATGGTAAGGCATTTTATGATCAAATTAAAAACAAATCGTTATATTTACAGACACTATATACCGTAACATCTACTTTAGGTAAAACTGTAGATTACGTAATTAGAGCAAACACTAACATTATAGAGGATAATATATATGGTGTAGCTTTAGCAAAAAATTTAGGTACTACAGCAAATCCACAAGATGAAACAATAATAGATGAGGATAAGACATTACCTAACGATCCTGGTACAAATATTTCTTATCGTAAAGATACTGGTTGTTATGGTATATATTATACTAAAGATTCTACAAAATTATTATATGTAACAGGAACTTACGATAATATAGATAGTCCAGAAACAGTTTCATCTAGAGTACGTTATTACAGAGATACTTTAGCATTTACTTATTATTATAAAAATTATATACCTCATGTTAGTTGGAATAATGTAAATAATACAGGACACGCTCATAATATAATAGGTAATAAATCCGAAATAATAGATTTTAAATATACTAAAGTAATAGATTTATTATCGTATTCTGGACAATCTGAAGATACTTTAGCATTGGATAATATGATCCAAATAGGTGATAACAAGTATTTGAATCAATATGATACATTATTTACTAACGCATCTCTAAATAATACTAACTTTGTATACAATAGCAAATGGGGACCTCATGGCGCTTGTTTTATTGTAAATACAAACGCAGGAATAATAAATAGGGGCGATAGCGTTACAGATAAATTCTATGTAAACGGTATAAATTCTATAGGTGAAGGCGATTTAATTCCAAAAGTAATATCTATTAGTTCTACAGTAATGGTTAATTTACGTACTAATGTAACACCATATGGAGGTAACAGTTACAATGTACGTGAAAATAGTACTTATGTAAGTACAGGATATATAATAGACGTAGATAACAACAAAATAGAAGATATACCAGTATTTGGTGGTGATACTTATATAAACATATTCGAATGGTTATCTGGTTATGTGAATCCAACAGAAAGATCTGTAAGACAACGTACAATGACTGTATGTTATTTTCCAGTAGAAACATCGATAAATACGGGTTTAATACAAGAACCAGAATTTCGTAGAGAACAGAATAGATATATTAATTTTTATGCCAGTGATGCATATTTTAACTATACACAAGCTTATCAAGAGTATAGATATAATAACGCATATTCTGCAAATTCTACAATATCGCAAAATGTAAGTTCTCACGAATTTGACGAAACCAATAAGACGTTTGACTGTAGAGTATATGGTTCAGATCCAAAAACAAACGATGAAACTAGTGACTCTTGGTTACATTTTAGACCTGCTGATTATATAGAAGTAGATACTAAATATGGTCCAATAAACGGTTTGAATGTATTTAATAATAGGTTATTCTTTTTACAAGAAAAAGCGTTTGGTACAATTTCAGTAAATGAACGATCTTTAATACAAGACAACAACCCTGGACAATTGGTACTAGGTACTGGAGACAAATTACAAAGATACGATTATATATCTGAACGTTATGGTATAAGAAACGAAGATACATACACCATAGTAAATTCAACAAATTCTTTTTACTGGTTAGATTATTTAAATAAAGCTATATTAAGATTTAGTGAAAATTTAAGTATATTATCTTTAGAAAAAAATATAAGTACATACTTAAATACAATAAGCTTGGATAATTCTGTAAGTATTAGCAATGCAGTATCAGATAATATGAATAACGAAATATATTTTACTATAGATGAAAATACTAACGATACACTAGTTTATAATGAAGAGTTAGGTAAGTTTACTTCATTTTATAGTTTTAGTCCAGAATCATACTTTAATTTTAATACTCAGTTATACTCTTTTAAGAATAATAAACTGTATTTACATAATAAAGTTACAAACGATAATAAGATATACGATGAATTACCTATTTATTCATTAGACTTTATAGCAAATAAGGATATTCAAAATATAAAAGTATTTGATACAATTACATATCCTGCTTGTGATTTAATAAAACCAGATAACGGTATAGAATGTATAAAGTGTGATACGTTAAATCAAACAACAGGTATTGTAGAGCCAAAAATAGATAATAGAGAAACTGAATATTTTGTAACTATACCTAGAGATAACAGTAAAATTAAATTTGGAAATAGATTAAGGGGTAAATATATGAAATGCAATATAACTTTTAAGAATATTAATGATTTCAGTTTACCTTACTTGAATGTATTATATAGATATTCTAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0956650d77a339420de40e374100db43e59a199ce8a6aa409e48e4c37b7276da
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank