Protein

View in Explore
Genbank accession
QBX30986.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MDLLNFTLLTIGVNEISDKRIKAEWTGQDTKLARLLSLANKFGAELEFKTYLNDDSSIKSFVVNIYHENDDTHHGVGRIHAKPLRYGKDFKSLIRTVDNTNIYNAVRPTGKAENGDIVTIGGMEAWSVNNEYGEREFYQQGELLYAPLSMQMFPSAFTSGTMADQWIRKDITVDSADKKVIRATAYRELKKHAYPDVSYEVEGFIDRGIGDTVFVYDDGFVPTLLLRMRVVEQEISSTNPSNNRTRFANFKTLDNLLPDDLQKRIDELFEASQPYLIKLATDNGVIFKNGIGQSIVTPTLYKGGKPLTANVTWRWSLDGAVKTGMTHTVRGADVTDTSTLTVAAYIGNDEVAVDELTFVNVLDGRDGPKGEKGEPGQRGADGLPGRDGVGIRSTTVTYASSTNGATAPTTGWTAEVPTVAPGNYLWTKTVWTYTDGNTETGYNVSRIGRDGNTGRDGIAGKDGVGIRSTTITYGKSTSGTIQPTSWTAQVPSVPNGQFLWTKTVWAYTDNTSETGYSVAKMGETGPTGAKGDRGATGPQGPQGPAGPKGEPGLQGLQGPKGDQGIPGPKGADGRTQYTHIAYADNATGGGFSQTDQSKAYIGMYQDFTVTDSTNPSAYRWSPWKGKDGKDGVPGPKGEDGRTPYIHWAYSDNADGTGLTTSDNGQRYIGHYSDYTQADSTDKTKYRWADRWAKIEVGGENLIDRTSEPFVMGYGITNTTWNPDTQRTRLDFTPSVNRAISGEILPQGNIFFESQNFVLRNGGKYTQAIRIGTDAPVRSLTGASFTWFHRKLSDNSVAHYNVPATLVNIAPNEYILYSTVVWDKGDAKIRPFDLANLHSALDFRNQGTYIEFYQPKLENGTIFTAYSISKNDRDAQIDAKADQALTQEQLNSLNERAGIIQAELEAKASLDTVNNILKQIKDMKAADEATWTKVEKDLITHLQRVIKIETNLGDQAQRWNAVDTFMQVSNDGLSLGKADGSSSMLFSPDGRITMFSSGTPVMYVDKGVIHIDNGIFSKTVQIGRFREEQYHNNPDINVKWYVG
Physico‐chemical
properties
protein length:1042 AA
molecular weight: 114503,77310 Da
isoelectric point:5,58508
aromaticity:0,09597
hydropathy:-0,55653

Domains

Domains [InterPro]
DC_0255
STR
1–1042
DC_0255
IPR010572
ENZ
19–251
IPR010572 IPR050149
IPR008160
STR
521–573
IPR008160
G3DSA:1.20.5.320
STR
543–598
G3DSA:1.20.5.320
QBX30986.1
1 1042
Architecture
STR
STR 1-1042
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan584
[NCBI] 		2548274 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX30986.1 [NCBI]
Genbank nucleotide accession
MK448990.1 [NCBI]
CDS location
range 34673 -> 37801
strand +
CDS
ATGGATTTACTGAATTTCACTTTGTTGACTATTGGTGTGAACGAGATTTCAGATAAACGAATTAAAGCTGAGTGGACAGGTCAAGATACAAAATTGGCACGTTTATTGAGTTTGGCAAATAAATTTGGTGCAGAACTTGAATTTAAAACTTACCTTAATGATGATTCTTCTATCAAGTCGTTCGTGGTAAATATCTATCATGAAAATGATGATACACATCATGGTGTTGGGCGCATCCATGCCAAACCATTGCGTTATGGAAAAGATTTTAAGAGTCTGATTCGAACGGTAGATAATACAAACATTTACAATGCCGTACGACCAACTGGAAAAGCTGAGAATGGCGATATTGTTACTATCGGTGGCATGGAGGCTTGGTCTGTAAATAACGAATATGGAGAGAGGGAATTTTATCAACAAGGGGAACTTCTTTACGCTCCGTTATCTATGCAAATGTTTCCTTCTGCATTCACAAGCGGTACCATGGCTGACCAATGGATTCGAAAAGATATTACTGTTGATAGTGCCGATAAGAAAGTTATTCGAGCTACAGCTTATCGTGAACTGAAAAAACATGCTTATCCAGACGTGTCGTATGAGGTAGAAGGCTTTATTGATCGAGGGATTGGCGACACGGTCTTTGTATATGACGATGGATTTGTACCGACGCTTTTACTTCGAATGAGAGTGGTTGAGCAAGAGATTAGTTCTACTAATCCATCTAACAATAGGACGAGGTTTGCTAACTTCAAGACGTTAGATAATTTGTTGCCTGACGATCTCCAAAAACGAATTGATGAATTATTTGAAGCGTCACAGCCCTACCTTATCAAACTGGCTACTGACAATGGCGTTATTTTCAAGAATGGAATTGGTCAATCCATTGTAACGCCTACTCTTTACAAGGGCGGTAAGCCTCTGACTGCCAATGTGACTTGGCGCTGGTCTTTGGATGGCGCTGTTAAAACGGGGATGACCCATACTGTCCGTGGCGCAGATGTTACAGATACATCTACTTTGACGGTGGCAGCATACATAGGTAACGATGAGGTAGCGGTTGATGAGCTGACGTTTGTAAACGTATTGGATGGTCGAGATGGACCAAAAGGCGAAAAAGGAGAACCTGGTCAAAGAGGGGCTGATGGACTTCCAGGTCGTGACGGAGTAGGTATTCGTTCAACGACCGTCACTTATGCTAGTTCAACCAATGGTGCTACGGCACCGACGACTGGTTGGACTGCGGAAGTTCCGACTGTTGCCCCTGGCAATTATCTTTGGACCAAGACGGTATGGACTTATACAGACGGCAACACGGAGACTGGCTACAATGTCTCTCGTATTGGTCGTGATGGTAATACTGGTCGAGATGGTATCGCAGGTAAGGACGGAGTAGGTATTCGTTCAACGACGATTACTTACGGAAAATCGACATCTGGCACAATTCAGCCAACGTCATGGACAGCTCAGGTACCAAGCGTCCCCAATGGTCAATTTTTATGGACAAAAACTGTTTGGGCATATACGGATAATACTTCAGAAACTGGTTACTCAGTGGCTAAGATGGGGGAGACTGGTCCTACAGGCGCAAAGGGTGACCGAGGAGCTACAGGTCCGCAAGGCCCACAAGGTCCAGCTGGTCCGAAGGGAGAACCAGGTCTTCAAGGGTTACAAGGCCCAAAAGGGGACCAAGGTATTCCAGGCCCAAAAGGTGCTGATGGTAGAACCCAGTACACCCATATTGCTTATGCCGATAATGCAACTGGTGGAGGATTTAGTCAAACTGACCAATCAAAGGCTTACATCGGCATGTATCAAGATTTTACGGTCACAGATAGCACTAATCCTAGCGCTTATCGTTGGTCTCCATGGAAAGGTAAGGATGGAAAAGATGGTGTTCCTGGACCTAAGGGGGAAGACGGTCGAACTCCGTACATTCATTGGGCTTATTCTGATAATGCAGACGGTACAGGTCTGACCACGTCGGATAATGGTCAGCGGTATATTGGTCACTATTCAGACTATACCCAAGCTGATAGTACAGATAAGACAAAGTATCGCTGGGCTGATAGATGGGCGAAGATTGAGGTAGGCGGAGAGAACCTCATTGATAGAACCAGTGAACCATTTGTGATGGGCTATGGAATCACAAATACTACATGGAATCCTGACACACAACGGACTAGATTAGATTTTACTCCGTCAGTGAATAGAGCGATTTCTGGCGAAATCTTGCCGCAAGGGAATATCTTTTTCGAAAGCCAAAACTTTGTGCTTAGAAATGGCGGTAAATATACCCAAGCTATCAGAATTGGTACAGATGCCCCTGTTCGTTCGTTGACTGGAGCAAGCTTTACATGGTTTCATCGCAAGCTGTCGGATAATTCTGTTGCCCATTATAACGTGCCTGCCACTTTAGTAAATATCGCCCCAAATGAATATATTCTGTATTCAACTGTGGTCTGGGATAAAGGCGATGCTAAGATTCGACCTTTTGATTTAGCGAACTTACATTCTGCCCTTGATTTTAGGAATCAAGGGACTTATATCGAGTTCTATCAACCAAAACTTGAAAATGGGACAATATTTACCGCTTATTCCATTTCCAAGAATGACAGGGATGCACAAATTGACGCCAAAGCGGACCAAGCATTGACCCAAGAACAACTCAATTCGCTAAACGAGCGGGCAGGTATCATTCAAGCGGAGCTGGAAGCCAAAGCGAGTCTAGATACTGTAAACAATATCTTGAAACAAATCAAAGATATGAAAGCAGCCGACGAAGCTACATGGACCAAGGTTGAAAAAGACTTAATAACTCACTTGCAGCGTGTCATAAAAATTGAGACAAACCTAGGAGACCAAGCACAGCGCTGGAATGCGGTAGATACCTTTATGCAGGTCTCAAACGATGGTTTGTCACTAGGTAAGGCGGACGGTAGCTCCAGCATGTTGTTTAGCCCAGATGGACGTATCACGATGTTTTCAAGTGGTACTCCAGTTATGTATGTGGATAAAGGGGTTATCCACATTGACAACGGTATCTTTTCAAAAACGGTTCAAATCGGACGTTTTAGAGAAGAACAGTACCATAACAATCCAGACATCAATGTTAAATGGTATGTTGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5bafd50c36b1d1a28fc2a1fc9e874ddbf800f1f133cff7fdbae73f6c942ec787
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank