Protein

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Genbank accession
YP_006382521.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,80
Protein sequence
MAYDGFFADISTRSSVNEVLLEAEAIKNQVDALYQGTQTEATNAANSAITAKNEADRAQRIADSINGENPPYGTRQESPFDPEFGAKGDGVTDDTAAFAAFEAKYVGMTIDLGFAKCKVSAIPTKNVYQNGSWLIPGDPNQFTRFAFEGDTVNGRPALYHPYGGGLNRLKKALTDVLNQYVGVVWIGDSITWGSGNQPECAPFDPRNGTLKDPRDWFGTNSYVNNMRRYLIDQYLPGSTVTVEGWEQSPWGHPIVKAVKDIVTMPIGNEFSRTIIGSTVTITDEASPSLPAKWRLLISNGNTVDGDNAYGSVSFKFTGSSFRLHLGCVNDTASDYQIFIDGASIGRFSTADGATIDNGELEDNSSGTRTHTFPFVSNALVEIRALRPLLPGGSPTKVLRIHGLIIPKTLRLTNNGINGSSLYSYRLYNLPPTCWTYSESCAVNAGDQFCFVQLGTNDRGTIRGPQTTNYIQTEAKNLLDAIPSYCVPILMVSNPAIPVVGANLQQSDIRNALHMVARERAVDFVDNYGIFQGMDRLAYAKDQLHPNQWGYSVMATNIIKALEASVDTSVTPPEPPLETFAVKPDDAIFTVTAPSGTQIIDRDSSAAYLGRQRPYRMNATNGGDIYFEFAAKGKDFGIAYSSLSTNILDYEVLVDGVSQGRFSTKYLEAGGGTTVYRNIRWHSIPDDSASHTIRIVGKYRPDFPGTTQVLYIEAVLYKQGGGLSAVGGTIPDPEPPEVVQTLLPTDPRFVPHLPAGTQIVDREAPAARLGVQRLYRAGTSPSGDCSVSFNVKGPSFGFAFSATASNMLDYQLFIDGVSQGTFSMVLGEVGGAAASYQNERFHNVPNDGGTHAVQMIFKRRATWPEATHVAYLEAFLAKEGVTIT
Physico‐chemical
properties
protein length:883 AA
molecular weight: 95818,07000 Da
isoelectric point:5,25712
aromaticity:0,09966
hydropathy:-0,24757

Domains

Domains [InterPro]
DC_2212
ATT
74–120
DC_2212 SSF52266 DC_1326
G3DSA:3.30.750.60
ATT
81–147
G3DSA:3.30.750.60 DC_1326 IPR051532
IPR036514
STR
367–563
IPR036514
cd00229
ENZ
389–560
cd00229 DC_1326
YP_006382521.1
1 883
Architecture
ATT
STR
ATT 74-147 | STR 183-883
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006382521.1
1 883
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,9691
Central domain 95 372 279 0,9336
C-terminal 373 883 510 0,2014
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-372
C-terminal
373-883

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage tf
[NCBI] 		1114179 Uroviricota > Caudoviricetes > Krylovvirus >
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006382521.1 [NCBI]
Genbank nucleotide accession
NC_017971 [NCBI]
CDS location
range 35186 -> 37837
strand -
CDS
ATGGCTTATGATGGATTTTTCGCTGATATCTCTACCCGTTCCTCGGTAAACGAGGTTCTGCTTGAGGCGGAAGCGATTAAGAACCAAGTTGATGCACTTTACCAAGGCACTCAAACGGAAGCAACCAATGCTGCCAACAGTGCCATTACAGCCAAGAACGAGGCTGATCGTGCACAACGAATTGCAGACAGCATCAACGGTGAAAACCCCCCATATGGCACTCGACAGGAATCTCCATTTGATCCTGAGTTTGGTGCCAAAGGTGATGGTGTCACTGATGATACTGCCGCCTTCGCTGCCTTTGAGGCAAAGTATGTAGGCATGACGATTGACCTTGGTTTTGCCAAGTGTAAAGTCTCTGCCATCCCAACCAAGAACGTTTATCAGAATGGATCTTGGCTAATCCCCGGTGACCCTAACCAGTTCACTCGATTTGCCTTTGAAGGTGATACCGTCAATGGTCGTCCAGCCCTCTATCACCCATATGGTGGTGGCCTGAACCGACTGAAGAAAGCCCTTACAGATGTACTGAACCAGTATGTCGGGGTTGTTTGGATTGGCGACTCCATCACTTGGGGCTCGGGTAACCAGCCAGAGTGTGCCCCCTTCGACCCTCGTAACGGAACCCTGAAAGATCCACGAGATTGGTTTGGGACTAACTCGTATGTTAACAACATGCGTCGTTACTTGATCGACCAATACCTTCCGGGATCTACCGTCACAGTAGAGGGTTGGGAACAAAGCCCTTGGGGCCACCCAATCGTCAAAGCTGTGAAAGACATTGTGACGATGCCTATTGGTAATGAGTTCTCTCGAACCATCATTGGTAGCACTGTTACGATTACCGACGAAGCTTCCCCAAGCCTTCCAGCTAAGTGGAGGTTGCTGATCTCTAACGGCAACACGGTAGATGGTGATAACGCATACGGCTCCGTTAGCTTCAAGTTTACTGGGTCTTCGTTCCGTCTACACCTTGGTTGCGTAAACGACACTGCTTCGGACTACCAGATCTTCATTGATGGTGCATCTATCGGTCGGTTCAGCACTGCTGATGGTGCAACCATTGATAATGGCGAGTTGGAAGATAACTCCTCCGGAACCCGGACCCATACCTTCCCATTTGTGTCAAATGCTCTGGTTGAGATTCGTGCGCTTCGTCCATTGCTGCCCGGCGGTTCTCCTACCAAGGTTCTTCGGATCCATGGCTTGATCATCCCGAAAACCCTTCGGTTGACCAACAACGGCATCAACGGCTCGTCTCTGTACTCTTACCGTCTGTACAACCTGCCACCAACTTGCTGGACTTATAGTGAGTCTTGTGCAGTCAACGCAGGTGACCAGTTCTGTTTCGTACAGTTGGGTACCAATGACCGTGGCACCATCCGTGGACCACAGACTACAAACTATATCCAGACTGAGGCTAAGAACCTCTTGGATGCAATCCCCAGTTATTGTGTTCCGATCTTGATGGTATCTAACCCAGCTATTCCGGTAGTTGGTGCTAACCTCCAGCAGTCGGATATCCGGAATGCTCTCCACATGGTTGCCCGGGAACGTGCCGTGGACTTCGTAGACAACTACGGAATCTTCCAAGGTATGGATCGTCTGGCATACGCCAAAGACCAACTCCACCCTAACCAGTGGGGCTACTCGGTAATGGCAACCAACATCATCAAAGCACTGGAAGCCTCGGTTGACACTTCGGTAACTCCTCCGGAGCCGCCTCTGGAAACCTTTGCTGTTAAGCCTGATGATGCAATCTTCACTGTTACTGCCCCATCTGGCACTCAGATCATTGACCGTGATTCGTCTGCTGCCTACTTGGGCCGTCAGCGTCCGTACCGGATGAACGCAACTAACGGTGGTGATATCTACTTCGAGTTCGCTGCGAAGGGTAAAGACTTCGGTATTGCCTACTCCTCGTTGTCTACGAACATTCTGGATTACGAAGTACTGGTCGATGGTGTCTCTCAAGGTCGATTCAGCACTAAGTATCTGGAAGCTGGCGGTGGTACTACTGTTTACCGCAACATCCGTTGGCACTCCATTCCAGATGACTCTGCGTCTCACACCATCCGGATTGTTGGTAAGTATCGCCCAGATTTCCCTGGGACTACTCAGGTTCTGTACATCGAAGCAGTTCTGTACAAACAGGGTGGTGGTTTGTCTGCCGTTGGTGGAACCATTCCTGATCCAGAGCCGCCAGAGGTTGTTCAGACTCTCCTGCCAACCGACCCACGGTTTGTCCCACACCTGCCTGCTGGCACTCAGATCGTAGATCGTGAGGCACCTGCGGCTCGTCTCGGTGTGCAGCGTCTGTATCGAGCTGGTACTTCACCTTCTGGTGATTGTTCTGTCTCGTTCAACGTTAAGGGGCCAAGCTTTGGATTTGCCTTCTCGGCAACTGCGTCTAACATGTTGGATTACCAACTGTTTATCGATGGTGTCTCTCAGGGCACTTTCTCGATGGTCCTTGGCGAAGTTGGAGGTGCAGCCGCTTCTTACCAGAACGAACGGTTCCACAACGTTCCAAACGATGGCGGCACCCATGCCGTCCAAATGATCTTCAAACGTCGAGCTACTTGGCCAGAAGCAACCCACGTTGCCTACCTCGAAGCGTTCTTGGCGAAAGAAGGCGTAACTATTACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec380cbc621297425701f64981098091b3fbafb5457ffb0e66230868ea9b9ae2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50