Protein

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Genbank accession

YP_004009530.1 [GenBank]

Protein name

baseplate wedge subunit

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MKQNLVIGNTVDDGTGDYLNKGGKKIINNFDDLYYELGDGSNPHAAGAWKTTSDADINGQFGKAYALNTTSNRITFRLPKGTTNDYNKVIRLRDVFAKWRTNPVTVIPASGDTIKGNAVSVVLSSNYADIEMVYCAPGRWEYVANKQIDKSTSADLSAVIKREFLATAGQVDFLDIFDGQEYNKANLEIYHRGNLLYYGNTFSTDSDYGSPGSGSSVVALNGKDVRLKRPCVEGDSVVIISYVDGLTQWRSTYNRLELRVLDESSTNEVSVEGSVYVGDLSTVKTLPIEAFGYEIGAGLINPNSLEVYINGVILTEAGSGGLPAFICEGAEANNLSDCLASGGLWLDSDIDYSYTQDSSGNVDNITFGRGFSHGDVVTIKWYNNNIGTTLSIEEILDQTNDLYIGSGQPINVTGGVRVTDFQNPTWPNVELLEPYNVSISTASNMFDLIYPVGSVYENFINPNNPSTYMGFGSWVLAGTKQVLVGWTPDDSSVFGLNNNDLDTLGNPSKRAGGTGGVMENTLSNEQLPATKTDEKVLIDDENGGVIIGGCQFDPDDQGPAYQKYREDFATTNKTHAPPQSINNLQPYVTVYRWMRIA

Physico‐chemical properties

protein length:	597 AA
molecular weight:	65004,14130 Da
isoelectric point:	4,46581
aromaticity:	0,09883
hydropathy:	-0,33082

Domains

Domains [InterPro]

IPR034695
Unmapped
1–597

IPR034695

IPR036240
STR
1–227

IPR036240 IPR054430 IPR053827

DC_2238
STR
1–575

DC_2238

IPR008987
ATT
2–149

IPR008987 IPR056391

IPR027411
Unmapped
49–146

IPR027411

YP_004009530.1

1 597

Architecture

ATT

STR

ATT

ATT 1-258 | STR 259-444 | ATT 445-596 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR034695	Unmapped	-	1	597	InterPro	Baseplate wedge protein gp10	-	-	-	-
IPR036240	STR	IPR036240	1	227	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
DC_2238	STR	DC_2238	1	575	Novel HMM	DC_2238	Central	Low	Positional only	73 proteins / 73 hits
IPR008987	ATT	DC_0752	2	149	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
IPR027411	Unmapped	-	49	146	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR056391	ATT	DC_0417	157	258	InterPro cluster	Baseplate protein gp9-like, C-terminal	C-terminal	Medium	Text match	98 proteins / 98 hits
IPR054430	TAS	DC_0704	262	384	InterPro cluster	Baseplate wedge protein gp10, domain 3	Central	High	Text match	67 proteins / 67 hits
IPR053827	ATT	DC_0313	445	596	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_004009530.1

1 597

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	309	309	0,9036
Central domain	310	508	200	0,2051
C-terminal	509	597	88	0,8566

Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-309

Central
310-508

C-terminal
509-597

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Acinetobacter phage Ac42 [NCBI]	762660	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Acinetobacter [NCBI]	469	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Genbank protein accession

YP_004009530.1 [NCBI]

Genbank nucleotide accession

NC_014660 [NCBI]

CDS location

range 95908 -> 97701
strand +

CDS

ATGAAACAGAATTTAGTCATTGGCAACACAGTAGATGACGGTACAGGCGATTACTTAAATAAAGGCGGTAAAAAGATCATTAATAACTTTGATGATCTTTATTACGAATTAGGCGATGGCTCAAATCCACATGCGGCTGGTGCTTGGAAAACAACAAGTGACGCCGACATCAATGGACAATTTGGTAAAGCGTATGCATTGAATACGACTTCAAATCGAATTACTTTTAGACTCCCTAAAGGCACAACTAATGACTACAATAAAGTAATTCGATTGCGAGATGTATTTGCTAAATGGCGCACAAATCCAGTAACTGTTATTCCAGCATCAGGCGATACAATTAAAGGCAATGCAGTGTCTGTAGTTTTATCATCAAACTATGCTGACATAGAAATGGTTTATTGTGCCCCAGGTCGTTGGGAATATGTTGCGAATAAACAAATCGATAAATCGACTTCAGCCGATCTTTCGGCTGTTATTAAGCGAGAATTTTTAGCGACAGCTGGTCAAGTAGATTTCTTAGACATTTTTGATGGTCAAGAATATAACAAAGCAAATTTAGAGATTTACCATCGTGGTAACTTGCTTTATTACGGTAATACTTTCAGCACGGATTCTGACTATGGTTCACCTGGTTCGGGTTCATCTGTTGTTGCATTAAATGGTAAAGATGTTCGTCTAAAACGCCCATGTGTAGAAGGAGACTCTGTTGTAATTATTTCATATGTCGATGGGTTAACACAATGGCGTTCGACATATAACCGCCTAGAGCTTAGAGTTTTAGATGAAAGTTCAACTAACGAAGTTTCTGTTGAAGGTAGTGTTTACGTTGGCGATTTATCGACCGTAAAAACACTTCCTATTGAAGCTTTTGGTTATGAAATTGGTGCTGGTCTTATTAATCCAAATTCATTAGAAGTTTATATTAATGGTGTTATTTTAACAGAGGCTGGTTCTGGTGGCTTGCCTGCATTTATTTGTGAAGGCGCAGAAGCCAATAATTTATCTGATTGCTTAGCCTCTGGTGGTCTCTGGTTGGATTCCGATATAGACTACTCATACACTCAAGATTCATCAGGAAATGTTGATAATATCACGTTTGGGCGTGGATTTAGTCATGGTGATGTTGTTACGATTAAATGGTACAACAACAATATTGGTACAACTCTTTCAATTGAAGAAATCCTTGATCAAACAAATGATCTGTATATAGGTTCTGGTCAGCCTATTAATGTTACTGGTGGAGTTAGAGTAACAGATTTTCAAAATCCAACCTGGCCAAATGTAGAACTTCTTGAACCGTATAACGTAAGTATTTCGACTGCCTCAAATATGTTTGACTTGATTTATCCTGTTGGGTCAGTGTATGAAAACTTTATAAATCCAAACAATCCATCAACGTATATGGGCTTTGGGTCATGGGTTCTTGCTGGAACTAAGCAAGTTTTGGTTGGTTGGACACCCGATGATTCTAGTGTATTTGGATTAAATAATAATGATCTAGATACTTTAGGTAATCCTAGTAAACGCGCCGGTGGCACTGGCGGCGTGATGGAAAATACGCTTTCTAACGAACAATTACCGGCTACAAAAACTGATGAAAAGGTTTTAATCGATGATGAAAATGGTGGCGTGATTATTGGAGGCTGTCAATTTGATCCAGACGATCAAGGCCCGGCATACCAAAAATATCGTGAAGACTTTGCAACGACAAACAAAACTCATGCACCACCACAATCAATTAATAATTTACAACCATACGTTACAGTGTATCGTTGGATGAGGATCGCATAA

Genome Context

Tertiary structure

PDB ID

7b260d0b013290fd9f1590538d29aa8d3a1b988b43baa06b40ad2d09f93fb3fa

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6362

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence