Protein

View in Explore
Genbank accession
QBI82573.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MADTIDLDGEKFVSPSFVTSAASLDDIYTAWVTDFEGSTTAYNPSWPSTDDSATLLPIPPLWTGGADRLVVSTECGVEIVPYRFTSASTHYSQAIAGVSRYYSINCGLRLAIIFHPTGVDSGITSFSGNYNADLALFRGTHNRSSENVQFVARVVPGRQIDVAIKNTAQTAGLPIKLVVLNGTTVVSSTDLTTIVQGGVTLVTCSIYGGTVSGTVVDQAGQPATRIVHVHERETGSVIGRGRSDSSGLFEIPVIAKVGTTMYVVGLDDENSPLINAVIADRIVLE
Physico‐chemical
properties
protein length:285 AA
molecular weight: 30149,48570 Da
isoelectric point:4,79655
aromaticity:0,07368
hydropathy:0,15719

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBI82573.1
1 285
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,7609
Central domain 21 219 200 0,4694
C-terminal 220 285 65 0,4341
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-285

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF126a
[NCBI] 		2563544 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI82573.1 [NCBI]
Genbank nucleotide accession
MK511042.1 [NCBI]
CDS location
range 43400 -> 44257
strand -
CDS
ATGGCCGACACCATCGACCTGGACGGAGAAAAATTCGTCTCTCCATCATTCGTCACCAGTGCGGCATCGCTCGACGACATCTACACCGCCTGGGTGACCGACTTCGAAGGCTCAACGACGGCCTATAACCCTAGCTGGCCGAGCACCGATGATAGTGCGACGCTGCTACCAATCCCGCCGTTGTGGACCGGCGGCGCCGATAGGTTGGTTGTTTCTACCGAGTGCGGTGTGGAGATTGTCCCCTACCGGTTCACCTCGGCCAGTACGCACTACTCACAGGCGATCGCAGGAGTTAGCCGGTACTACTCGATCAACTGCGGGCTGCGCCTGGCGATTATCTTCCACCCGACTGGTGTCGACTCAGGTATTACCAGCTTTTCGGGCAACTACAACGCCGACCTGGCGCTATTTCGCGGCACGCATAACCGATCCAGTGAAAACGTCCAATTCGTGGCGCGTGTCGTTCCGGGCAGGCAAATCGATGTGGCCATCAAGAACACCGCCCAAACTGCTGGACTCCCCATCAAGCTGGTGGTCCTCAACGGCACCACTGTGGTGTCTTCCACCGACCTGACTACGATCGTTCAGGGTGGTGTCACACTGGTGACATGTTCCATCTACGGTGGAACCGTCTCGGGCACCGTCGTGGACCAGGCTGGCCAGCCTGCTACCCGCATCGTCCATGTTCACGAGCGCGAAACAGGGTCGGTGATCGGTAGAGGACGCAGCGACTCATCAGGCCTGTTCGAAATTCCGGTCATCGCGAAGGTGGGTACCACCATGTACGTAGTCGGCCTGGACGATGAGAACTCGCCGCTGATCAATGCTGTGATCGCCGATCGCATCGTGCTGGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
97f768603c66778fd153e99c815a694a302bcd212575b19d16f0b1b5fadae415
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4656
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank