Protein

View in Explore
Genbank accession
WVO01530.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFARIMLYGNTPPIPKSILLSTSEYSETYSLIYNEKLYLSGSNANGQLGTGNNTNSFNEWIMVPEVDEVRLCSTGFSQTIYITSTGKVMLTGHNVLKSSVTVSNTWIDVTSSFVGIDINEIKYINIDRNGLMLIHNDGSVWGIGTDTEGWSGQGKANVGFFSLKKLFNSSNAVACMSGTGAARIILEDGTVLSSGRNTQNQCNASSVSNVLTFTESFPGVDVQKINQIKMCNNNCIIFLSDGTYYGTGWGSYGSLGNGNTNSGFYGFVSGTLPILPANFRSYFKFINTSSGSVSYYMTVDNEIYGCGYRSKNYVNSTVDIGTFKKCAQNEKYDGLMLMSGSGNIVLFNPSSSFPNIATSSPKNTAPTIQSNVPTYGIGSVLPLVLPM
Physico‐chemical
properties
protein length:389 AA
molecular weight: 41993,82440 Da
isoelectric point:6,15000
aromaticity:0,10797
hydropathy:-0,06761

Domains

Domains [InterPro]
IPR009091
STR
18–162
IPR009091 IPR009091
IPR009091
STR
29–314
IPR009091
IPR009091
STR
30–314
IPR009091
IPR051553
Unmapped
37–280
IPR051553
WVO01530.1
1 389
Architecture
STR
STR 18-330 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01530.1
1 389
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,0710
Central domain 233 378 147 0,4484
C-terminal 379 389 10 0,3831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-378
C-terminal
379-389

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01530.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 50424 -> 51593
strand -
CDS
ATGATACCATTTGCTAGAATCATGTTATATGGAAATACCCCACCAATACCAAAATCAATTTTATTGAGTACTTCAGAATATAGTGAAACGTATTCATTGATTTACAATGAAAAGTTATATTTGTCTGGTAGTAATGCCAATGGTCAATTGGGTACTGGAAATAACACAAATTCATTTAATGAGTGGATTATGGTTCCCGAAGTTGATGAAGTTAGGTTATGTAGTACTGGTTTTTCACAAACAATATATATTACAAGTACTGGTAAAGTTATGTTAACTGGTCACAACGTATTGAAAAGTTCTGTAACAGTTTCGAATACATGGATTGACGTTACATCTAGTTTTGTCGGAATAGATATTAATGAGATAAAATACATTAATATTGATAGAAATGGTCTTATGCTTATTCATAATGATGGTTCGGTGTGGGGTATTGGTACTGATACAGAAGGTTGGTCAGGTCAAGGGAAAGCCAATGTTGGTTTTTTTTCGTTAAAGAAATTGTTTAATTCATCAAATGCGGTAGCATGTATGTCTGGTACTGGAGCAGCAAGAATTATCTTAGAAGATGGCACAGTACTATCATCTGGACGTAATACACAAAACCAATGTAATGCAAGTAGTGTTTCTAATGTATTAACATTTACTGAATCATTTCCGGGTGTGGATGTTCAAAAAATCAATCAAATTAAAATGTGCAATAACAATTGTATAATTTTTTTATCTGATGGGACATATTACGGAACTGGATGGGGATCATATGGTTCGTTGGGTAATGGTAATACTAATAGTGGGTTTTATGGATTCGTATCAGGAACATTACCAATTCTACCAGCTAATTTCCGTAGCTATTTTAAATTTATTAATACGAGTTCAGGAAGCGTATCATATTACATGACAGTTGATAATGAAATATATGGTTGTGGATATAGAAGTAAAAACTATGTGAATTCTACAGTTGACATTGGAACATTCAAGAAATGTGCACAAAATGAGAAATACGATGGGTTGATGCTTATGAGTGGTTCTGGTAATATAGTATTGTTTAATCCATCTTCATCTTTTCCTAATATAGCCACATCTTCACCAAAAAATACAGCACCAACAATACAAAGTAATGTTCCAACATATGGTATTGGTTCAGTACTTCCGTTGGTATTGCCAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7d992fad289ee378d7f192e13a223cad5f6d783c90019291cf2cafdf680880a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7436
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank