Protein

View in Explore
Genbank accession
QEA09427.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLRFPMSLRPIVSKGYSQTRGSNIWRTEVQGGVPRQGRDTYFEPVPISVTLVVSSLGRQAFYSFLNNIDGGASSFIMPHDTGLGLEDHQVLITSDISDSTDDGKNWVITFTATAERTAIQEDTCLTKNLPDLFGCYGDCLGGFLKAYGAAQSTFPRIWSNEGPAGYPPINLLAPTLDSRIVYDGPQVYYINRNGNLVQSAVNEWPLTFIDGVAVGRVPPEVGGLNLLKMSEDLSDPVWAKTRTTVTYGGTQDPTGGTGASKLVPTTTTGTHNVLQLITPEASTAYTYSVFVKANGYNNAIVQIGVFASQVASNPVYVDLSTGVITSANDYSRCGIIAVGDGWFRVWVRVITNSSPTRINASVWASDAANNTSFPGDGVSAISVFGAQMEKSNNSSSYVKTEENLITRPAASAKVTMNGAASIDITYSDGTVVNVPSVDGYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:466 AA
molecular weight: 49858,02640 Da
isoelectric point:4,81650
aromaticity:0,09442
hydropathy:-0,11330

Domains

Domains [InterPro]
DC_0353
STR
49–466
DC_0353
NF048003
Unmapped
227–411
NF048003
QEA09427.1
1 466
Architecture
STR
STR 49-466
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Shashou
[NCBI] 		2580403 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEA09427.1 [NCBI]
Genbank nucleotide accession
MK931440.1 [NCBI]
CDS location
range 17508 -> 18908
strand +
CDS
ATGAGTGATTTGAGATTCCCTATGTCCCTTCGACCAATAGTGTCGAAGGGGTACTCCCAAACGCGAGGGAGTAATATCTGGCGTACAGAAGTGCAAGGTGGCGTACCGCGACAGGGGCGTGATACATACTTTGAGCCAGTGCCGATTAGCGTTACGCTCGTCGTATCGTCGCTCGGGCGACAGGCGTTCTATAGCTTCCTGAACAACATAGACGGCGGTGCGTCTTCATTTATCATGCCGCACGATACGGGTTTAGGTCTCGAAGACCACCAGGTACTTATTACGTCGGACATTAGCGACAGCACCGACGATGGTAAAAACTGGGTAATTACTTTCACAGCAACCGCGGAGCGGACTGCGATTCAGGAAGATACCTGCCTTACGAAGAATCTACCGGATTTGTTCGGTTGTTATGGGGATTGCTTAGGTGGATTCCTTAAAGCATACGGAGCCGCGCAATCAACGTTTCCACGAATTTGGAGCAATGAAGGGCCTGCCGGATACCCGCCGATTAACCTTCTGGCGCCCACGCTGGATAGCCGTATTGTGTACGACGGACCGCAGGTTTACTACATCAACCGAAACGGCAATCTTGTGCAGTCCGCCGTCAATGAATGGCCTCTTACGTTTATTGATGGGGTCGCTGTTGGGCGTGTGCCGCCGGAGGTTGGTGGTCTAAACCTACTAAAAATGTCAGAGGACTTATCGGATCCCGTATGGGCAAAAACAAGGACTACTGTTACATACGGCGGAACGCAAGACCCTACCGGCGGAACGGGCGCATCCAAACTAGTCCCAACAACAACCACTGGTACTCACAACGTTTTACAATTGATAACCCCGGAAGCATCTACGGCATACACCTATTCTGTTTTTGTGAAAGCAAATGGGTACAATAATGCTATTGTTCAGATCGGAGTATTTGCTAGTCAGGTGGCAAGTAATCCTGTTTATGTAGACCTATCTACGGGGGTGATAACATCAGCTAATGACTATTCAAGATGCGGGATAATAGCAGTAGGTGATGGCTGGTTTAGAGTATGGGTGCGAGTTATTACTAATTCCTCCCCGACAAGGATAAACGCGTCTGTGTGGGCCTCTGACGCTGCTAACAACACGTCTTTCCCAGGTGATGGTGTTAGTGCTATATCAGTTTTTGGCGCCCAAATGGAGAAATCTAATAATTCATCGTCGTATGTTAAAACCGAAGAAAATTTAATTACACGCCCCGCGGCATCGGCAAAAGTAACCATGAATGGTGCGGCAAGCATTGACATTACCTATTCCGACGGCACTGTGGTAAACGTTCCGTCTGTTGACGGTTACGCCACCATCCCCCAAGCGGATTCTGCGTGGGGTAGCAAATATATCACCCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9566df081c0b97547f771383d276c38df106397c860720d50652d96fe611ce2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Siphophage Shashou Higbee,T., Yang,S.-H., Moreland,R., Liu,M. and Ramsey,J. 2019 31582440 GenBank