Protein

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Genbank accession
AGF88259.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MNFVVNNVPDGVPIRIFIDEICEDNDVTEDFDALKKDAIFYIVESAGGGVVKGVMKIFSVILKPLAKLLSPSAKGLSSNFANSQADSPNNSLTDRNNKPRPYERSYDICGTVQTVPNNLMTTYKIFNDTGRIIEYGYYDAGRGHLDIKAEDVTDGDTRVQDIDGSSVAIYAPYTSPNNTSTPQLQIGEVIDQQLYTTIESNEIDGITLRAPNDLGVTFSGETAVVTLSGTTGRITETAGGVDFTEDFSVGDIANLNAWTTNTVNIGDHYTVTSVSETVIELDVSSRLLSWSSASGNPIRGSDGENSIRPTDTLDKTLTDWVSINRSTVERIVVNIAAPNGMYKDNGSKLTMSATAEVQYQALDESGAPFGPIYTATGTITGRSSDYNGVTIYGYLPTASRVRVRARRTSDTDRGFNGTVSDEIVYANLYGQSVDTTPHYGNRTTVHSARKQTPRATEVRQPQLRMIATEMVFKYLGGGVFDTVMTPNKQAVQSLIRLARDPVVGGLDLSVANMDALLETQEEVESYFGSSDAGEFCYTFDDYKTTMQEIVTIIAEAIFCTPYRKGADILLDFERPRLGPEMVFTHRSKVKTSEKWSRTFNDPQVFDSLKFSYIDPVTNVKETISIPETGGLKTETYDSKGVRNKKQAYWLAHRRHQKNILRKVNVSFTATEEGIFARPNRPISVVKGSRMATYDGYVTSVDGLTVHLSSPVQFTAGEPHSLVLKTRDGGAQSIPVIEGPDNRSVIMLSVPQEAIYTGNSALKTEFSFGSDSRHAAQMIMVSTVEPSDDRTVRITGFNYDADYYKYDGVSPFGRAFSDGFSNGFS
Physico‐chemical
properties
protein length:824 AA
molecular weight: 90404,64670 Da
isoelectric point:5,01493
aromaticity:0,08859
hydropathy:-0,35364

Domains

Domains [InterPro]
DC_0118
STR
1–657
DC_0118 DC_0808
NF040662
Unmapped
326–804
NF040662
AGF88259.1
1 824
Architecture
STR
RBD
STR 1-657 | RBD 675-818 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGF88259.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,9764
Central domain 202 400 200 0,5154
C-terminal 401 824 423 0,1903
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-400
C-terminal
401-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage FSL SP-031
[NCBI] 		1173749 Uroviricota > Caudoviricetes > Sarkviridae > Cornellvirus > Cornellvirus SP31
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enterica subsp. enterica serovar Cerro
[NCBI] 		340188 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
bb50bbf3e58f151d091213f37a71157daaa6e6368fef763c00077123be614d69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8451
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50