Protein

View in Explore
Genbank accession
YP_010094048.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLNHISDESKYKTFNPAGTSFPSNIVNVQDALAALNPIAVNGIPGSTETVPGIIRIATQQEVNAGDSANTVVTPKTLKERLGNPQASTTKIGLTRYATTAEAVQGTIDNAAVVPTGLKGAIDNAFTVRTAKENVLGVIQLATIPMAEAGMDDTSAMTPLKTQRAIAKATAVIPVYGPATESALGVVRIATNGQVAQGTLRDGYAVSPSGLASLTSNESRAGIARAATAAEVNANTSGAIFVTPNTLNQRVGTTSTKGLVKLTTVAGQGDGNTALAFNADVLNLRGGQTVNGTTGFGNINVNGNINAGSGYIAGQQIATVNMLVDSVPVGTIIMWPGQYPPNGNWMHCDGTWLGRNDSRFTTLFSILGTLYGGDANNFALPDMRGMFPRGVGKSNIMNQYSGNDSKGKPGLGYGCGDAYLGQSAPQAVRRHKHNIGWGEHHNRGDAYFGCTVRNGYLGNNKRDSDNYLYFTNEGDEVEDASIRDGFGTMNTEGLIQWENRPWSIALNFVIKVR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 54223,98290 Da
isoelectric point:7,69517
aromaticity:0,06589
hydropathy:-0,23837

Domains

Domains [InterPro]
DC_0176
STR
1–428
DC_0176
SSF69349
STR
246–341
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
246–283
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
246–312
IPR015173 SSF88874
IPR011083
ATT
333–391
IPR011083
YP_010094048.1
1 516
Architecture
STR
ATT
STR
STR 1-318 | ATT 319-391 | STR 392-515 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage myPSH1140
[NCBI] 		2108137 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Karamvirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010094048.1 [NCBI]
Genbank nucleotide accession
NC_055739 [NCBI]
CDS location
range 96019 -> 97569
strand +
CDS
ATGTCTACTAATACTCTAAATCACATCAGTGATGAATCAAAATATAAAACGTTTAACCCGGCGGGAACTAGTTTCCCGTCAAATATTGTAAACGTTCAAGACGCATTGGCTGCATTAAATCCAATTGCAGTTAATGGCATTCCAGGCTCAACTGAAACCGTTCCTGGCATAATTCGAATTGCTACCCAACAGGAAGTTAATGCTGGTGATTCAGCAAACACTGTAGTTACTCCGAAAACTTTAAAAGAACGTCTTGGTAATCCGCAAGCAAGTACAACTAAAATCGGTTTAACTCGTTACGCTACTACAGCTGAAGCTGTACAAGGAACTATTGATAATGCGGCTGTGGTTCCAACTGGATTAAAAGGCGCAATTGACAACGCATTTACTGTTCGTACTGCGAAAGAAAACGTTTTAGGTGTTATTCAATTAGCTACTATTCCAATGGCTGAAGCTGGAATGGACGATACTTCTGCAATGACTCCTCTTAAAACCCAGCGAGCTATTGCAAAAGCTACTGCTGTTATTCCGGTGTATGGTCCTGCAACTGAATCTGCATTAGGCGTTGTAAGAATTGCAACTAATGGTCAAGTAGCCCAAGGTACTCTTCGTGATGGATATGCTGTATCTCCAAGCGGATTAGCTTCATTAACTTCAAATGAATCTCGTGCTGGTATTGCTCGTGCAGCTACAGCAGCTGAAGTTAATGCTAACACCAGTGGAGCAATATTTGTAACTCCAAATACTCTTAATCAGCGTGTTGGCACAACTTCCACAAAGGGTCTTGTTAAATTAACTACTGTCGCTGGCCAAGGTGATGGAAACACAGCGCTTGCATTTAACGCTGATGTACTTAATCTCCGCGGTGGACAAACTGTTAATGGTACTACTGGCTTTGGCAATATCAACGTCAACGGTAATATCAACGCAGGTAGTGGATATATTGCTGGACAACAGATTGCTACTGTTAATATGTTAGTAGATTCTGTTCCAGTTGGAACAATCATTATGTGGCCAGGCCAATATCCACCAAACGGAAACTGGATGCATTGTGACGGTACTTGGCTTGGAAGAAATGACAGCCGTTTCACAACTTTATTCAGCATTCTTGGTACTTTATATGGCGGAGACGCAAATAACTTTGCTCTTCCAGATATGCGCGGAATGTTCCCTCGTGGTGTAGGTAAATCAAACATCATGAATCAGTATTCAGGAAATGACTCTAAAGGTAAACCTGGATTAGGATATGGCTGTGGTGATGCTTACTTAGGTCAATCGGCTCCTCAAGCAGTTCGTCGTCATAAACATAACATCGGTTGGGGCGAACACCATAACCGTGGTGATGCATATTTCGGTTGTACTGTAAGAAACGGTTATCTTGGAAATAACAAACGAGATTCAGATAACTATCTATACTTCACAAACGAAGGTGATGAAGTAGAAGATGCTTCTATCCGTGATGGCTTTGGTACAATGAACACTGAAGGTTTAATTCAGTGGGAAAACCGCCCTTGGTCAATTGCTCTAAACTTTGTAATAAAAGTAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a538bb770e418102b253c0593fe8cf9a344275c92d8cc55a9eec2f5f499a0de1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of lytic bacteriophages against Enterobacter cloacae Ramesh,N., Prasanth,M., Tamhankar,A.J. and Lundborg,C.S. 2018-06-21 — GenBank