Protein

View in Explore
Genbank accession
YP_009290608.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAQEITWRNIGATVSPGSASSMSAGTTGVQQALGALGDIISRQQEMNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLAAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSATERRNATLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVSDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR
Physico‐chemical
properties
protein length:521 AA
molecular weight: 57076,70000 Da
isoelectric point:4,99094
aromaticity:0,03647
hydropathy:-0,67793

Domains

Domains [InterPro]
DC_0193
STR
1–521
DC_0193
Coil
Unmapped
202–229
Coil
YP_009290608.1
1 521
Architecture
STR
STR 1-521
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_MAG4
[NCBI] 		1639814 Uroviricota > Caudoviricetes > Schitoviridae > Litunavirus > Litunavirus Mag4
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009290608.1 [NCBI]
Genbank nucleotide accession
NC_031104 [NCBI]
CDS location
range 55057 -> 56622
strand -
CDS
ATGGCCCAAGAGATCACTTGGCGTAACATTGGTGCAACGGTAAGTCCTGGCAGTGCATCTTCGATGTCTGCTGGGACTACCGGTGTCCAACAAGCACTTGGTGCACTGGGTGACATCATCTCCCGTCAACAGGAGATGAATGTCAACAATGCCAAGTTGCAGCGTGAAGCCAACACGCAAAGCTATCTGGACCAGGTGGCAGCATCCACCCTGGAACAACTCAGCAACGCAGACTATCGCAGTGGACTGGAGGCCCAACGTGATGCGATGGGGATGAACCTGGATCGTGCTGCTACTCGTGATGCGATCACCAAGCAGATCAGTGCTCAGCAGAACCAAGCGGCTGCTACTCAGAAGTTCGACGACATGCAGGCTGAAGTAGGCCAACGGGGTATCGTGGACCAGCTTCGTACCCTGGCAGCTGAAGGTCGTGCTGGTGAAGTCAATCAGATCTTGGCTGAGCAACAGCTGATCAACGAGGGCGAGATCCGCAAGGAACTAACCGGTGTGCAGGATGCTATCCAGAATCGGCAGTACCGAGCAGCTGGTGAACAGCGTGCACAGGCAGCAGCCAACCGGGCAGCTGAAGCACACTCCCTCTCCATGGCTGCTGGTCGGGAGAATCTGGCTTTCACTCGTGAGCAGCGTGATGAACTACGCCGTGATCGGGATGAAGCGAAGCTGGTTTCGGGAACCATCGCTACTACCTTCCAGGACTACGACGAGTCCCGTCAGGCTCAGAGCGAGATCATGCGGATCGTGGGCAAGGAAGTCGGTATGCCTACCGATGACCAGGGCATGCCTGACATGAGCCGAGCTTCGCAAGACCAGCTTGATGCCTTCAGCAATGCGCTGAACGAAGCTGGTGTGCAAGCCAATACCTCTGCTACCGAGCGGCGGAATGCTACACTCAAGTCTCTCGTGGATGCCGGGGTAAGCTCGAAGGGTATCGCTCAGGCCAAGCAAGAGATGGAACTCCGGGAATCCCTGGAGGGTCTGGCTCCACAAGATCGCACGAAGGTTGAAGCAACCATTGGTGCGGTTAACGCAGAACTGGATACCCTGCAACGGACGGCTACCGAGGACTACGAACGGGAAGTTGCACGTAACCCGTTTGTCGAGCCTGACAAGGATCCGCTGGGTTCGGTCAACAAGATCGTAGACAAGGCTGTGAAGTCTGGTTTCGGCTGGGAAGGTGACCGCCAGGATCTGAACAACATGCTCGTGGACTTCGCCACCAACGGCATCAAGCTGCCGGATGGACGTACTGCTGTAGTCCCGTCGAAGCTACTGGAGCAGGCGTTCAACACCACGAACACTTGGCTGTTCAAGAATGCCGGTGACGTGGAGAAACGGATCATCGAACTCATGACCACTGATGGCATGACTCAGATGCGAGAAGACGCTCCGACCATTCGGGAAAACTTCCTTAAAACCGTGTCGGACATCGCCAACCAAAAACGGTCAAATGCCGTTAAGGTAACTCGCTCGGCAGAACGGGAAAAGGGTGTTACCATGGACCCAACCGATGATCTAACTTTTGCACTACGAGGGAGGAAACGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ce08c962f02ea08600f4e4137c2a65caedb138ec6501c450633ab0a21013efe3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6514
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage vB_PaeP_fi6 - a new obligatorily lytic Pseudomonas aeruginosa podovirus active against pathogenic P. aeruginosa strains Kwiatek,M., Parasion,S., Miziak,L., Gryko,R. and Lobocka,M.B. 2014-07-04 — GenBank