Protein

View in Explore
Genbank accession
UNY40182.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MAGKFFDIPFAATGDKDAVPNAVQTDGSVSYSEGFGFDYERENTDPAYKPVPRSGINGLYFDVTQALGIIQSQGFADWTSEAAPYVINSAVRHNGQNWQSAIADNSDTPGVGAGATSWFPLGQQTQLLDAVRINIASASTVDLTSLAPNTRHINITGTTGINGFTIAAGNCYFVRFAGVLTLTNSAALVTQTGANITTAAGDTCLLRAVTNNNVELLAYSAIPASNAQVATGTNEFRPITPAGLMSVFGKRSFTGNDFIRIPDVPGGLIIQWGKSLTNVVGNGNTGPITLPVAFPDGHLCAALGENTSDITGGGPGWSYTATSSTITLYNGESGARSGATYVIFGY
Physico‐chemical
properties
protein length:346 AA
molecular weight: 35975,46670 Da
isoelectric point:4,69060
aromaticity:0,09538
hydropathy:0,00318

Domains

Domains [InterPro]
DC_0930
STR
1–345
DC_0930
G3DSA:2.60.40.3940
RBD
251–346
G3DSA:2.60.40.3940
IPR054075
RBD
265–343
IPR054075
UNY40182.1
1 346
Architecture
STR
STR 1-346
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UNY40182.1
1 346
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,7280
Central domain 207 335 130 0,0022
C-terminal 336 346 10 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-335
C-terminal
336-346

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PcuM_ KLEP17-4
[NCBI] 		2928860 No lineage information
Host Pseudomonas cuatrocienegasensis
[NCBI] 		543360 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UNY40182.1 [NCBI]
Genbank nucleotide accession
OM654375.1 [NCBI]
CDS location
range 20610 -> 21650
strand +
CDS
ATGGCCGGTAAATTTTTTGACATACCGTTCGCCGCCACTGGCGACAAAGACGCAGTTCCGAACGCCGTGCAAACTGACGGCAGTGTTTCTTATAGTGAAGGCTTTGGTTTTGACTATGAGCGCGAGAACACCGACCCCGCATACAAGCCAGTCCCGCGCAGCGGAATCAACGGCCTATACTTTGATGTGACTCAGGCTCTCGGCATAATTCAGAGCCAAGGCTTTGCCGACTGGACATCTGAGGCCGCACCTTACGTCATCAACTCAGCAGTAAGGCATAACGGCCAAAACTGGCAGAGCGCCATTGCTGATAACAGCGACACGCCAGGTGTAGGTGCGGGCGCCACAAGCTGGTTCCCGCTTGGACAGCAAACCCAGCTGCTTGATGCCGTGCGAATTAACATCGCTTCGGCTTCAACTGTTGACCTGACGTCGCTTGCGCCGAACACCAGACATATCAACATTACCGGAACCACTGGCATTAACGGATTCACCATCGCTGCTGGCAACTGCTATTTTGTTCGATTCGCTGGGGTTCTCACGCTTACCAACAGTGCGGCCCTAGTTACGCAGACTGGCGCCAACATCACTACAGCGGCCGGGGATACATGCCTTCTTCGAGCAGTGACCAACAACAACGTAGAGCTGCTGGCCTACTCCGCAATCCCGGCAAGCAATGCGCAGGTCGCTACAGGCACAAATGAATTTCGGCCAATCACCCCCGCCGGCCTAATGAGCGTGTTCGGCAAGCGATCTTTTACTGGCAACGACTTTATCCGCATCCCTGATGTTCCGGGCGGCCTGATCATTCAGTGGGGTAAATCCTTGACCAACGTAGTTGGCAATGGTAACACCGGCCCTATTACTCTTCCGGTCGCGTTTCCTGACGGTCACTTATGTGCGGCCTTAGGAGAGAACACCAGCGACATTACAGGGGGTGGGCCAGGCTGGTCTTACACTGCAACCAGTTCGACAATCACCTTGTATAATGGCGAAAGTGGCGCAAGAAGCGGCGCCACCTATGTCATTTTTGGCTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3babf83b3a49aedb08c20363db7410301217e8681391eb88e47cac262258c717
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pseudomonas bacteriophage vB_PcuM_ KLEP17-4 Simoliunas,E., Simoliuniene,M., Kvederaviciute,K. and Sulcius,S. — — GenBank