Protein

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Genbank accession
CAB4161734.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLTKVSYSLITGAPANILDYGADATGTADSSTAITLALAASDAVFIPKGTFLITSNITIPRANITLFGDGDSSVISYSGNNRRIICNQDNFTMSSFMVDGNKPDVGWETTNNYDFGLRVGDGAAARVYGIKVLDMTFKDIGLDGLYIDNCGNVLVNDGCKFINCRRWGIVLDGGVYGTSFVTINAKFFDCDFATGPVGKVYPLGAIDLEPYDTGFNCNWCVIDGAVSKYGDIRVVPSTPGTVTNTTIKNCTVIEADIRVFNVQEDVVFENNNILSSSNNRMRIDYTADSVPTQATVKTTSVKNSLVQSFQTNGRANWLPRDFVAVSDGTYSTNGVGSTGYASMNIDGSLVNVSTFSSASGVLPVQAVTLSTTATIGIGDVVFVALQVDRTDGNADDVGANWMRMEYGPIDRRTSLKNGKGQWLLYCTESDAAYSSPSMLVGISASGALTAGVDIQINRAFAFINPTTLDISELVASYTPGVKTVNPYTGPTLDAYNSDFVIVTSASPQNIDTINGGVVGKRLSLTTSSGNAVTLRDTTASAGNIKLISASSFILDLGASTNAITLMYYSDNFWYQVS
Physico‐chemical
properties
protein length:578 AA
molecular weight: 61399,03670 Da
isoelectric point:4,48610
aromaticity:0,09170
hydropathy:0,05969

Domains

Domains [InterPro]
IPR012334
STR
12–317
IPR012334 DC_2113
IPR011050
STR
16–312
IPR011050
IPR024535
ENZ
17–113
IPR024535
CAB4161734.1
1 578
Architecture
STR
RBD
STR 12-317 | RBD 454-578
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4161734.1
1 578
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9360
Central domain 30 313 285 0,9900
C-terminal 314 578 264 0,9921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-313
C-terminal
314-578

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4161734.1 [NCBI]
Genbank nucleotide accession
LR796724 [NCBI]
CDS location
range 7550 -> 9286
strand -
CDS
ATGAGCCTTACAAAAGTTTCGTACAGCCTGATTACAGGCGCACCGGCAAACATTCTTGACTACGGCGCTGACGCAACAGGCACTGCCGATTCGTCTACGGCTATCACGTTGGCGTTAGCCGCATCGGATGCGGTGTTTATTCCAAAAGGCACGTTTTTAATCACAAGCAACATCACCATCCCACGGGCAAACATTACCTTGTTTGGTGATGGTGATTCCAGCGTGATTTCCTATAGCGGAAACAACCGCCGCATTATTTGCAACCAAGATAACTTCACCATGAGCAGTTTCATGGTAGACGGCAACAAGCCAGACGTTGGCTGGGAAACTACAAACAACTACGATTTTGGTTTGCGCGTTGGCGATGGGGCTGCGGCTCGTGTTTATGGCATTAAAGTGCTAGACATGACTTTCAAAGACATTGGTCTTGACGGCCTATATATAGACAACTGCGGCAACGTCTTGGTGAACGATGGATGCAAATTCATCAACTGCCGACGCTGGGGCATTGTGCTTGATGGCGGCGTTTACGGCACTAGCTTTGTGACTATCAACGCCAAGTTTTTTGACTGCGACTTTGCAACTGGGCCAGTTGGCAAAGTCTATCCCCTTGGCGCAATTGACCTTGAACCGTATGACACTGGATTTAATTGCAACTGGTGCGTGATTGACGGGGCAGTCTCTAAATATGGCGATATTCGTGTTGTTCCATCTACGCCTGGCACTGTTACAAACACCACCATTAAAAATTGCACTGTTATTGAAGCAGACATTCGGGTTTTTAACGTTCAAGAAGATGTTGTGTTTGAAAACAACAACATTCTTTCGTCTAGCAACAACCGTATGAGGATTGACTATACGGCTGACAGTGTGCCTACTCAAGCGACAGTTAAGACTACATCTGTCAAAAACAGTCTTGTGCAATCGTTCCAGACAAATGGCCGTGCCAACTGGTTGCCAAGAGATTTTGTTGCTGTTTCAGATGGTACTTACAGCACTAACGGTGTTGGTAGCACTGGGTATGCGTCAATGAACATTGATGGCAGTCTTGTTAATGTTTCAACATTCTCATCTGCATCTGGCGTGTTACCCGTACAAGCGGTCACTCTGTCAACAACAGCAACAATCGGAATCGGTGATGTTGTTTTTGTTGCATTGCAGGTTGACCGTACAGACGGAAATGCTGACGATGTTGGCGCAAACTGGATGCGAATGGAATACGGCCCAATTGATCGTCGCACTTCGTTGAAAAACGGCAAAGGTCAGTGGCTGTTGTATTGCACCGAATCTGACGCTGCATATAGCAGCCCGTCCATGCTTGTTGGCATTAGCGCATCCGGCGCATTAACTGCTGGCGTTGATATCCAGATCAACAGAGCATTTGCCTTCATCAACCCAACAACGCTAGACATTAGCGAGTTGGTTGCCAGCTACACACCAGGGGTTAAAACAGTCAATCCATACACAGGCCCGACTTTGGATGCCTATAACTCAGATTTTGTAATCGTAACATCTGCGTCACCTCAAAACATTGACACAATTAATGGTGGCGTTGTTGGAAAGCGTTTGTCTTTGACAACATCATCTGGAAATGCGGTCACACTTCGAGATACAACAGCCAGTGCTGGCAACATCAAATTGATTAGCGCCAGTAGTTTTATTCTTGACCTTGGCGCATCAACAAACGCAATTACGTTGATGTACTATTCCGACAACTTCTGGTATCAAGTTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a18e52cf3e840b1bf97bd7658b2d7f08b6a06c93a32ed0fbf340c6b210f9bcf8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7013
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50