Protein

View in Explore

Genbank accession

QFP93047.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,73

Evidence RBPdetect2

Probability 0,94

Protein sequence

MAKISALTPLAKLVGDEVIALAKAGKNYSIAVSALIESLGPNFKGILPTVGDLPAPADSKRGEIYVIDSHFWAYGEDPQNPGTLKWNDLGSFLGPKGDEGPQGKPGDKGKDGDPGADGNDGKDGMLPDVDNTVVGEISAVDFQSKVTDAISGVKPTKTVSETYDVRIDATKTSKGNVSVMPTEKGRYVWAAGYKALGADSHSTAVIYVPDSTGVPVFLSYTTSEKGDKGEPGPKGEDGKNSVGMKVVGLIDDEKDLPDPVDFEIGDTYIVGKHFHMKIGVEWVDIGDFTGPNGNSAYQIAVLNGFVGTEVEWLKSLKGADGIGLRIIGSLDTKTLLPEQAEFNGDSYIIRDDEKMYVWDGSAWSTVGQVGPEGKAGKDAYEIAIDQGFRGTRDEWLLSLKVKGEKGDPGEKGEKGDPGTNASSVMFKGGIATQTALPATGNTVSDAYMVEDVGHLFVWTGSTWYDTGVFTAKGEKGDQGDEGPQGKPGKDGIDGKSAYELAKAAGFQGTDIEWLATLIGPGITARGTVADVADLQNVTSPKAGYAYNVLGGDKIGHQYVYDGTNFVDMGDIRGARGPKGDKGDPGAEGKPGPSLIPKGTVADSNDLLAIQNPVAGWTYGVTGGDDAGHQFVYNGSDWIDMGDLRGIQGKEGKQGEQGKTAGAVNFKGVVADVPSLPTAGNLVSDAYFVGTHLYVWQGASWIDCGSFQGLKGDEGPQGKQGPIGPDGKSAYQVAVAGGFQGDEAAWLKSLVGAPVQAKGVLATLADLNAVVSPSNGWLYNVEENGHMYIRNGAAWVDCGEVRGIQGIQGPKGEPGVDGADGQNGKDGTSFTIVGRVATEADRPANPAVGNGVFVETELQMWDGTTWVSLGDFVGPEGEQGPQGEMGAGIKILGKKASQGDLPATGEVGDGYMIGVNFWVWDGTEYIDVGQIRGPKGDQGLRGIQGLKGEKGDPGDKGEKGEQGTIIIILDRDPTAIDGRINDYFMSTVDQKLYRKTSDTAWAYLGTFGGGNVYECPKDGKKYLKVYGNWVEYTEPAVQEAPIDGHRYFRKDGAWEIFDMYDVKVITVTDGKCDCSKAQWFKVDGTKATTVAFNNLPAAGSNRATTIPMTIKGKGGMFNWPSNLKWSGGSQPPFGDTMTLLVFTWDGEFLTGSLSQSY

Physico‐chemical properties

protein length:	1156 AA
molecular weight:	121931,27520 Da
isoelectric point:	4,67571
aromaticity:	0,08910
hydropathy:	-0,39784

Domains

Domains [InterPro]

DC_1340
STR
25–220

DC_1340 DC_1340 G3DSA:1.20.5.320 DC_1340 DC_1065 G3DSA:1.20.5.320 G3DSA:6.20.230.10

G3DSA:1.20.5.320
STR
94–146

G3DSA:1.20.5.320 DC_1340 DC_1340 DC_1340 DC_0114

PTHR24637
Unmapped
95–962

PTHR24637

DC_1065
STR
493–593

DC_1065 G3DSA:1.20.5.320

QFP93047.1

1 1156

Architecture

STR

RBD

STR

RBD

ATT

RBD

STR 25-843 | RBD 844-931 | STR 932-989 | RBD 990-1034 | ATT 1035-1057 | RBD 1058-1156

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1340	STR	DC_1340	25	220	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	94	146	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
PTHR24637	Unmapped	-	95	962	PANTHER	COLLAGEN	-	-	-	-
DC_1340	STR	DC_1340	194	309	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	297	395	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	385	512	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	470	516	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_1065	STR	DC_1065	493	593	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_1340	STR	DC_1340	571	661	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	647	746	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1065	STR	DC_1065	729	826	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_0114	RBD	DC_0114	799	1156	Novel HMM	DC_0114	C-terminal	Low	Positional only	42 proteins / 42 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	800	843	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	932	989	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
G3DSA:6.20.230.10	ATT	G3DSA:6.20.230.10	1035	1057	Merged direct domain	G3DSA:6.20.230.10	N-terminal	Low	Positional only	46 proteins / 46 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Serratia phage PCH45 [NCBI]	2608368	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

QFP93047.1 [NCBI]

Genbank nucleotide accession

MN334766.1 [NCBI]

CDS location

range 118115 -> 121585
strand -

CDS

ATGGCTAAAATTTCAGCTCTTACCCCCTTGGCTAAATTAGTAGGTGACGAGGTTATTGCTCTGGCCAAAGCTGGCAAGAACTATAGCATTGCCGTCTCCGCACTGATTGAGTCACTGGGACCTAACTTCAAGGGGATTCTGCCCACTGTAGGCGATTTGCCTGCACCTGCCGATTCCAAGCGTGGCGAGATCTATGTGATCGATAGCCATTTCTGGGCGTATGGCGAGGACCCACAGAATCCCGGTACGCTTAAGTGGAATGACTTAGGCAGCTTCCTTGGGCCGAAAGGCGATGAAGGTCCACAGGGTAAACCTGGGGATAAAGGTAAAGATGGCGATCCCGGTGCCGACGGTAACGACGGTAAAGACGGGATGCTGCCAGATGTTGATAACACCGTAGTCGGTGAAATCAGCGCAGTCGACTTCCAGAGTAAAGTCACCGACGCAATCAGTGGGGTTAAACCCACTAAGACCGTAAGTGAAACCTACGACGTTCGCATCGACGCAACTAAAACCTCCAAGGGTAACGTTTCCGTCATGCCGACCGAGAAAGGTCGTTACGTCTGGGCTGCTGGTTATAAAGCACTGGGTGCTGATAGCCACTCCACTGCCGTTATCTACGTTCCCGATTCCACTGGCGTCCCTGTCTTCCTGAGTTATACGACTTCGGAAAAAGGTGACAAAGGAGAACCTGGTCCGAAAGGTGAAGACGGTAAGAACTCAGTAGGTATGAAAGTCGTTGGTTTGATCGACGACGAGAAAGATCTGCCAGATCCGGTTGATTTCGAAATCGGCGATACCTATATCGTCGGTAAACACTTCCACATGAAGATCGGTGTGGAATGGGTTGACATCGGTGACTTTACTGGTCCTAACGGTAACAGTGCTTACCAGATCGCTGTCCTGAATGGTTTCGTTGGTACTGAAGTCGAGTGGCTGAAATCCCTGAAAGGGGCTGACGGCATCGGTCTGCGTATCATCGGTTCTCTGGACACTAAAACTCTTCTGCCTGAACAGGCTGAGTTCAACGGCGACTCTTACATCATTCGTGATGATGAGAAGATGTACGTATGGGATGGTTCCGCATGGTCAACTGTTGGTCAGGTTGGTCCGGAAGGTAAAGCTGGTAAAGATGCGTACGAAATCGCAATCGACCAGGGCTTCCGCGGTACTCGCGATGAGTGGCTTCTCTCGCTGAAAGTTAAGGGTGAGAAGGGTGACCCTGGCGAGAAGGGTGAAAAAGGTGATCCGGGAACTAACGCAAGCTCCGTTATGTTCAAAGGCGGTATCGCTACCCAAACCGCACTTCCTGCTACCGGTAATACTGTATCTGATGCCTATATGGTTGAAGATGTAGGTCACCTGTTTGTCTGGACTGGTTCTACCTGGTACGACACCGGCGTCTTTACTGCTAAGGGCGAGAAGGGTGACCAGGGTGACGAAGGTCCTCAGGGCAAACCAGGTAAAGACGGTATTGATGGTAAGTCCGCCTACGAACTCGCTAAAGCAGCGGGCTTCCAGGGCACTGACATCGAATGGCTGGCTACCTTAATCGGTCCGGGCATCACTGCTCGTGGTACGGTTGCTGATGTTGCTGATCTCCAGAACGTCACTAGCCCGAAAGCAGGCTACGCCTATAACGTTCTCGGCGGCGATAAGATTGGCCACCAATATGTTTACGATGGTACTAACTTCGTTGACATGGGTGACATCCGCGGTGCACGTGGACCTAAAGGCGATAAAGGTGATCCAGGGGCTGAAGGTAAACCAGGTCCGTCTCTGATTCCGAAAGGAACAGTTGCTGACTCTAACGATCTTCTGGCTATCCAGAACCCGGTTGCTGGTTGGACCTATGGCGTAACTGGCGGAGACGATGCTGGTCATCAGTTCGTTTACAACGGTTCCGACTGGATCGACATGGGCGATCTGCGCGGTATTCAGGGTAAAGAAGGTAAGCAGGGCGAGCAGGGTAAAACCGCAGGCGCTGTAAACTTCAAAGGCGTGGTCGCTGATGTTCCGAGCCTCCCTACTGCCGGTAACCTGGTATCTGACGCATACTTCGTTGGCACTCACCTGTACGTATGGCAGGGCGCTAGCTGGATCGACTGTGGTTCCTTCCAGGGACTCAAAGGCGACGAAGGTCCACAAGGTAAGCAAGGTCCGATCGGTCCTGACGGTAAGTCCGCTTATCAGGTAGCTGTAGCAGGTGGTTTCCAGGGTGATGAAGCTGCATGGCTCAAATCTCTGGTAGGTGCACCGGTACAGGCTAAGGGCGTTCTCGCTACCCTCGCCGATCTTAACGCTGTTGTTAGCCCGTCTAACGGTTGGCTGTACAACGTCGAAGAGAACGGTCACATGTACATCCGTAACGGCGCTGCATGGGTCGATTGCGGTGAGGTACGTGGTATCCAGGGTATCCAGGGACCTAAAGGTGAACCTGGTGTTGACGGTGCTGATGGCCAGAACGGTAAGGATGGTACTTCATTCACCATCGTCGGCCGTGTTGCAACCGAAGCAGATCGTCCGGCCAATCCGGCTGTAGGTAACGGCGTATTCGTCGAAACCGAACTTCAGATGTGGGACGGTACTACCTGGGTTAGTCTCGGCGACTTCGTTGGTCCAGAAGGTGAACAGGGTCCTCAGGGTGAGATGGGTGCCGGGATTAAGATCCTTGGTAAGAAAGCCTCTCAAGGCGATCTGCCCGCTACCGGCGAGGTTGGCGACGGTTACATGATCGGCGTTAACTTCTGGGTCTGGGACGGCACCGAGTATATCGATGTTGGTCAGATCAGAGGGCCGAAAGGCGACCAGGGTCTGCGTGGTATTCAGGGCCTGAAAGGTGAGAAGGGCGATCCGGGCGATAAAGGTGAGAAGGGCGAACAAGGCACTATCATCATTATCCTCGACCGTGACCCAACTGCCATCGACGGTCGTATCAACGACTACTTCATGTCTACTGTAGATCAGAAGCTGTACCGTAAAACTTCTGACACTGCATGGGCATACCTGGGCACCTTCGGTGGCGGTAACGTCTACGAATGTCCGAAAGACGGTAAGAAGTACCTGAAGGTCTACGGCAACTGGGTTGAGTACACCGAGCCTGCCGTACAGGAAGCTCCAATCGATGGTCATCGTTACTTCCGTAAGGATGGGGCGTGGGAAATCTTTGACATGTACGACGTCAAGGTAATTACCGTGACCGATGGTAAGTGCGACTGCTCTAAAGCACAGTGGTTCAAGGTAGACGGAACGAAAGCTACGACCGTAGCATTCAATAACCTGCCTGCCGCTGGTAGCAACCGCGCAACCACCATCCCGATGACGATTAAAGGCAAAGGCGGTATGTTTAACTGGCCGTCTAACCTGAAATGGTCCGGTGGTTCTCAGCCTCCGTTCGGCGACACGATGACGTTGCTGGTCTTCACCTGGGACGGTGAGTTCCTGACCGGTTCTCTGAGCCAGTCGTACTAA

Genome Context

Tertiary structure

PDB ID

578fa664e8fc66830a9c461fa7b19e665a5a09798cf1847f5f48488013d241e6

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7057

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Type III-A CRISPR-Cas RNA targeting inhibits a nucleus forming jumbophage	Malone,L.M. and Fineran,P.C.	2019-09-25	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature