Protein

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Genbank accession
WYW04098.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADEFLASNEFPGDGVTTLFNVAFKGNRPDAESGTVPYINASDVKAQQITPATATSPESAIDLTCTPVGPNQFNVTPVVPTGKIVRIYRATQDEYNLVDYQSLQTVGEADLDLANRQSLFIVQEAHDLAVRASEDAQDANTVAFGAVAVANAAAADADEALSVANQALGASSAAVSIATDAAEAADAAEAHASAADAAAAAAQVAADNAEAASAAAVATANAAASDAATALATANGISATANQALTNSNTAIATANAAEATANAIAGTANSALAAASSAVATANAANDTANGIAATADLALDNSAEALDTANDALALVVNKQNLNDNLTALSGLTGAADRVPYFTGLGALSLANFTAYGRSLAALTDSAGLKALANIPGRNVLINGSMMIANRGSSVTVPDPLGLYGGPDRWICVNSAGGTMSQYSSTASGSDPIPTIVQQVTATPTDLSGTHYLGGIQQRIEGYNARKLVGKALSLSFLFQSNVNGVYSVALRGGTTPQSWVSTFNYTGSGAPQRFSFAIPTVPAINVVANNSIGMELHIGTQNNGTYSTNTLGWQAGTFMKFNASTGWSSTIGNYISAGEVQLEIGPKSDFDHEDITTNLLRCQRYFESIPGTVDPGQGAYVYKPYKVGKRAPATLTLSGGSLSGANFDNGGGVYACRAPASVAATGQADFNLWADAEL
Physico‐chemical
properties
protein length:681 AA
molecular weight: 68973,08550 Da
isoelectric point:4,36287
aromaticity:0,06461
hydropathy:0,02922

Domains

Domains [InterPro]
DC_1152
ATT
13–125
DC_1152 DC_0568
IPR005604
ATT
74–131
IPR005604
WYW04098.1
1 681
Architecture
ATT
STR
ATT 13-131 | STR 230-681
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-BotAed
[NCBI] 		3132675 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW04098.1 [NCBI]
Genbank nucleotide accession
PP496471.1 [NCBI]
CDS location
range 36221 -> 38266
strand +
CDS
ATGGCTGATGAATTTCTAGCGTCCAACGAATTCCCCGGCGACGGTGTGACGACTCTGTTCAACGTAGCGTTCAAAGGCAACCGCCCTGACGCTGAGTCGGGCACTGTTCCGTACATCAACGCCTCGGATGTCAAGGCGCAGCAGATTACTCCGGCCACGGCGACTTCGCCAGAATCCGCTATTGATCTGACCTGTACCCCAGTTGGTCCGAACCAGTTTAACGTAACACCTGTCGTGCCCACCGGCAAGATCGTAAGGATCTACCGCGCCACGCAGGACGAATACAACCTTGTCGATTACCAGTCCCTGCAAACCGTAGGTGAGGCTGACCTCGACTTGGCCAACCGTCAATCGCTGTTCATCGTACAGGAAGCACACGACCTCGCGGTTCGTGCCAGTGAAGATGCACAGGACGCAAACACTGTAGCCTTCGGCGCAGTGGCTGTGGCTAACGCTGCTGCTGCCGACGCGGATGAAGCACTCTCCGTGGCTAACCAAGCCCTCGGTGCGTCATCCGCTGCCGTCTCTATCGCTACCGACGCCGCCGAAGCTGCGGACGCTGCTGAAGCTCACGCCTCTGCTGCTGACGCTGCTGCTGCTGCTGCACAGGTCGCTGCCGACAATGCCGAAGCTGCGTCTGCTGCCGCTGTAGCCACGGCCAACGCCGCTGCCTCTGACGCCGCTACGGCTCTGGCTACTGCCAACGGCATCTCGGCTACGGCCAACCAAGCGTTGACCAACTCCAACACTGCAATCGCTACGGCGAACGCAGCGGAAGCTACGGCCAACGCCATTGCCGGTACGGCGAACTCTGCGCTTGCCGCAGCTTCGTCTGCTGTGGCCACCGCGAACGCTGCTAACGACACAGCCAACGGCATTGCCGCTACGGCTGATCTGGCGCTGGACAACTCCGCTGAAGCCCTCGACACCGCGAACGACGCACTGGCCCTTGTGGTCAACAAGCAGAACTTGAACGACAACCTGACTGCACTCTCGGGCTTGACCGGGGCTGCGGATCGTGTGCCGTACTTCACTGGCTTGGGTGCCCTGTCGCTGGCGAACTTCACCGCGTATGGCCGCTCGCTGGCTGCGCTGACAGACTCCGCTGGGCTGAAGGCTCTCGCCAACATCCCCGGTAGGAACGTGCTGATCAACGGCTCAATGATGATTGCAAACCGTGGTTCATCAGTTACCGTCCCTGACCCGCTGGGTCTGTATGGTGGACCTGACCGCTGGATCTGCGTCAACTCAGCTGGCGGTACGATGTCTCAGTATAGCTCGACGGCTTCCGGCTCTGATCCGATCCCTACGATTGTACAGCAAGTGACCGCCACGCCGACTGACCTGTCAGGCACCCATTACTTGGGTGGCATCCAGCAGCGGATCGAGGGCTACAACGCCCGTAAGCTGGTGGGCAAGGCACTGTCACTGTCGTTCCTGTTTCAGTCCAATGTTAACGGGGTATACTCAGTAGCACTGCGCGGCGGCACTACGCCGCAGTCGTGGGTTAGTACCTTCAACTACACAGGGAGCGGTGCACCGCAGCGTTTCTCCTTCGCGATCCCTACTGTGCCAGCGATAAACGTGGTTGCTAACAATAGTATCGGTATGGAACTACACATCGGTACGCAGAACAACGGAACTTACAGTACCAATACCCTCGGGTGGCAGGCTGGCACGTTCATGAAGTTCAACGCTTCCACTGGGTGGAGTAGCACAATCGGTAACTACATCTCTGCTGGTGAAGTCCAACTTGAGATCGGCCCTAAGTCCGACTTCGATCACGAGGACATTACCACAAACTTGCTGCGTTGCCAACGGTACTTCGAGTCGATTCCCGGTACAGTAGACCCCGGCCAAGGGGCATACGTGTACAAGCCATACAAAGTTGGTAAGCGTGCACCAGCGACATTAACACTGTCCGGTGGTAGCCTCTCTGGCGCTAACTTTGACAACGGCGGTGGTGTGTACGCATGCCGCGCCCCGGCGAGTGTGGCCGCAACTGGGCAAGCAGATTTCAACCTATGGGCTGATGCGGAGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06995185970350349feacc3b428c1e7a83120e8d7782471ba24ce6c2c6032701
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank