Protein

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Genbank accession
XYM58618.1 [GenBank]
Protein name
tail collar domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MTVYYTKQKAKFGGVTGTIIPFPISLEIPSFRDELLPAGFLKCDGSILKASQYPALAATLGIGPDCKFAKDPESIATDEIQLPDLGSKFVRSSTATGEYLDIVLNQSPTTKKVGTEIEIVSLIGSEATISYSGEFLIQGKSGIGYNGRAILEAQATTFSDRLSEDNFQAHNHAADSAVMTYTGRWTDNRFTGTFGARGGNEAQTEATNDYVPVPSPEGSTTLVSHTHDINLPSSQELRDNDTQTMFFNNFTIPAEGLSSTVTVTTDDDIKLDDVTSPFYLVEYIIKI
Physico‐chemical
properties
protein length:287 AA
molecular weight: 31068,23920 Da
isoelectric point:4,56488
aromaticity:0,09059
hydropathy:-0,22265

Domains

Domains [InterPro]
DC_1651
STR
2–287
DC_1651
IPR037053
ATT
16–92
IPR037053
SSF88874
STR
16–232
SSF88874
IPR011083
ATT
17–62
IPR011083
XYM58618.1
1 287
Architecture
STR
ATT
STR
STR 2-15 | ATT 16-92 | STR 93-287
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-FR1
[NCBI] 		3413218 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58618.1 [NCBI]
Genbank nucleotide accession
PV340855 [NCBI]
CDS location
range 32315 -> 33178
strand +
CDS
ATGACAGTATATTACACAAAACAAAAAGCAAAATTTGGGGGAGTTACTGGGACAATTATTCCATTCCCCATTTCATTGGAAATTCCTAGTTTCAGGGATGAATTGCTACCAGCAGGATTTTTGAAATGCGATGGTAGTATATTAAAAGCATCACAGTATCCCGCACTTGCTGCTACTCTTGGTATTGGTCCAGATTGTAAATTTGCCAAAGATCCTGAAAGTATTGCCACAGATGAAATCCAATTACCAGATTTGGGATCTAAATTTGTCAGGTCTTCTACAGCAACAGGAGAATATTTAGACATTGTGCTAAATCAAAGTCCAACTACAAAAAAAGTTGGTACAGAAATTGAAATTGTATCACTAATTGGTAGTGAAGCAACAATTTCATATTCGGGTGAATTTTTAATCCAAGGAAAAAGTGGTATTGGTTATAATGGTAGAGCAATATTAGAAGCTCAGGCAACTACATTTAGTGATAGATTATCTGAAGATAATTTCCAGGCACACAATCATGCGGCAGATTCTGCTGTTATGACATATACTGGAAGATGGACTGATAACAGATTTACTGGAACTTTTGGTGCTAGAGGTGGTAACGAGGCGCAGACCGAAGCAACTAACGATTATGTTCCTGTACCTTCACCAGAAGGTTCTACAACGCTAGTTTCCCACACTCACGACATTAATTTACCTTCATCGCAGGAATTGCGTGATAATGACACCCAAACAATGTTCTTTAATAATTTTACTATTCCAGCAGAAGGATTGTCGAGCACAGTTACAGTAACGACAGACGATGATATTAAACTAGATGATGTTACATCGCCATTTTATCTTGTAGAATACATTATCAAAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
338f26a71c7fab865905a78eb2eaa369331c8cd96f13e194db12f4131b424f95
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50