Protein

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Genbank accession
AGC36025.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MKADGSLKSLLQGISQQPVRDRLPGQGTAQINMSADPVKGLSRRPGEDLVNQLGPAGAAKGWGTFQTQDGKQWIVKITASGPQVFDFNGNQATVTVPGGDTYWSTNGQWSIATMKGKTYLANSGVIVEQDTAMSSYPNYTSYTMAVFQILGGNYGKTYTIRINNSVAASFTTPDGSVSSHALQIDTVYIASQLAASLTANGYNSGTWHVSRVEDIITVHNNVGVITSAIISDGAGNINAKAMLDSVGDVADLPRFCWHNFAVRVAQEVDPEEDLWLKFVMDNPAGSLGTSGAWYECLAPGLSVGLKNTSMPRCLTYNATTGAFTAAVVDWADRNVGTNTTNPMPSFVGYPITDISMFQSRLIVLAGPNLIASRSKRYEDFFVGSASTLVDSDPLDLTSQAAFASTLKYAIPHNKDLVIFSTKGQFILFGRSAITPSNAALVLTTSFEADLMARPQACGRNVFFATKYGRFAGVREFYTEGGTDINDTRSITQHVNKYMVGSTVHMSATSNYDHLLVHTDNDRKNVYVYQFIWNDQEKIQSAWSKWQFSHEIVYSFFDDELIYLIMQIGTTYYLLRLSLDTVPEGALDYHVHLDARFDVTGVNTAFVLPFDWLADVPLTIVQGDDCPHPGLPVRISSIVYDPGEAGYVVTMREDMMGGDIIVGVNMLSEYQPTMPRAKDSDGVVISNARLVINQFLVSLAGTGEINGQKMTAWGDGPEVSFQGYITNSPGSMTGSPALDDHIFKMPFKAKADEAEVRFYTDSHWPMTILDIEWEGTINKRGKRIPVGN
Physico‐chemical
properties
protein length:787 AA
molecular weight: 85946,78100 Da
isoelectric point:5,15208
aromaticity:0,10165
hydropathy:-0,13329

Domains

Domains [InterPro]
IPR058003
TTP
5–783
IPR058003
AGC36025.1
1 787
Architecture
TTP
TTP 5-783 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGC36025.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,9814
Central domain 133 331 200 0,2587
C-terminal 332 787 455 0,2921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph09
[NCBI] 		1220716 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizobium etli
[NCBI] 		29449 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGC36025.1 [NCBI]
Genbank nucleotide accession
JX483880 [NCBI]
CDS location
range 26604 -> 28967
strand +
CDS
ATGAAGGCAGACGGTAGCCTTAAATCACTACTGCAGGGCATTAGCCAGCAGCCTGTTAGAGATAGGTTGCCGGGCCAAGGTACTGCTCAGATTAACATGAGTGCAGACCCTGTTAAGGGCCTGTCTCGTCGCCCCGGTGAGGACCTTGTAAATCAACTTGGTCCAGCCGGTGCAGCTAAGGGCTGGGGAACCTTCCAGACACAAGACGGTAAGCAGTGGATTGTTAAGATCACTGCATCCGGCCCACAAGTATTCGACTTCAATGGAAACCAAGCAACAGTCACTGTACCCGGTGGAGATACATACTGGTCTACTAATGGCCAATGGTCTATCGCCACTATGAAGGGCAAGACGTATCTGGCTAACTCTGGTGTGATCGTAGAACAGGACACAGCGATGAGTTCGTATCCAAACTACACTAGCTACACCATGGCAGTATTCCAGATACTTGGTGGTAACTACGGTAAGACATATACCATTCGTATTAATAACTCTGTAGCAGCATCCTTCACCACGCCTGATGGTTCGGTGAGTTCACATGCCTTGCAGATTGATACAGTGTACATTGCTTCGCAGCTAGCGGCAAGTCTGACTGCTAATGGGTATAACTCCGGTACGTGGCACGTAAGCCGCGTAGAAGATATCATTACTGTGCATAACAACGTAGGTGTAATCACATCTGCTATTATCTCTGACGGTGCTGGTAATATTAACGCTAAAGCTATGCTCGATAGTGTAGGCGACGTAGCAGACTTGCCACGTTTCTGCTGGCATAACTTTGCTGTGCGCGTTGCACAGGAAGTAGACCCGGAAGAGGACCTGTGGCTTAAGTTCGTAATGGACAATCCAGCAGGTAGCTTAGGTACATCGGGCGCTTGGTATGAGTGCCTAGCTCCCGGTTTGTCAGTAGGGCTTAAGAACACAAGTATGCCTCGTTGCCTAACCTATAATGCAACTACAGGCGCTTTCACAGCAGCGGTAGTTGATTGGGCAGATCGTAACGTTGGTACTAACACTACTAACCCAATGCCTAGCTTTGTAGGATATCCGATCACAGATATTAGTATGTTCCAGTCGAGGCTTATTGTCTTGGCAGGGCCTAACCTGATTGCATCTAGGAGTAAGCGATATGAAGACTTCTTCGTGGGGTCAGCTAGTACCCTTGTGGATAGTGATCCTCTGGATCTTACCAGTCAGGCTGCCTTTGCTAGCACTCTCAAGTATGCTATCCCTCATAACAAAGATTTGGTTATCTTTAGTACGAAGGGTCAGTTTATTCTGTTCGGTAGGTCGGCGATTACTCCGTCGAATGCTGCGCTAGTTCTGACTACCAGCTTCGAAGCTGACTTGATGGCTAGGCCGCAGGCGTGCGGACGTAACGTATTCTTTGCTACCAAGTATGGTCGCTTTGCAGGCGTGCGTGAGTTCTACACTGAGGGTGGTACTGATATTAACGACACGCGATCAATTACTCAGCATGTCAATAAGTATATGGTGGGAAGTACGGTCCACATGTCAGCAACGTCTAACTATGACCACCTGCTTGTGCATACGGATAACGATCGTAAGAATGTGTATGTGTACCAGTTCATCTGGAACGATCAGGAGAAGATACAATCCGCATGGTCCAAGTGGCAGTTTAGTCATGAGATCGTGTACTCGTTCTTTGATGACGAACTGATTTATCTGATCATGCAGATCGGTACTACGTACTACCTGCTGCGCCTGTCTCTTGATACCGTACCGGAAGGTGCGCTGGATTACCATGTCCATCTAGACGCTCGCTTTGACGTGACCGGAGTTAACACAGCATTCGTGCTTCCGTTCGACTGGCTTGCAGACGTACCACTGACTATCGTACAGGGTGATGATTGCCCGCATCCCGGACTACCAGTGCGCATTAGCAGCATTGTGTATGATCCCGGTGAAGCTGGTTATGTTGTCACTATGCGAGAGGATATGATGGGCGGGGATATTATCGTGGGCGTTAATATGCTCAGCGAGTATCAGCCTACTATGCCTCGTGCTAAGGACAGTGATGGTGTTGTTATCAGCAATGCACGACTGGTTATTAATCAGTTCCTCGTGTCGCTTGCAGGTACGGGTGAGATCAATGGGCAGAAGATGACTGCATGGGGAGATGGACCAGAGGTATCCTTCCAAGGTTATATTACCAATAGTCCCGGCTCTATGACAGGCAGTCCTGCACTAGATGACCACATATTCAAGATGCCATTCAAAGCTAAGGCTGATGAGGCAGAAGTACGTTTCTATACAGATAGCCATTGGCCTATGACCATTCTGGATATCGAGTGGGAAGGAACCATTAACAAGCGCGGTAAGCGCATCCCTGTAGGAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8ced32c824c9511acd56d6a93b92bda97db8a3cd9bd8c991c050a64bf1debb3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9130
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50