Protein

View in Explore
Genbank accession
AZF91199.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MYVSFYYDNSYHVFYVAKIVENDFSFQVTCNNTNLELAMEVARPLADSGGPKTIEWYLQNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKKFVIDIYHRPDKNHHGIGKARGDVVLYYQSGLKGVQVTSDKTQLFNAGVFTGADGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPISRERYPSTMNPDSADNWTRKDFQTEYKDVESLKAYALRTIKQYAYPLLTYTVDVQSSFLDNYKDINLGDTIKIVDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSDALQQRIDEIVSKSLPYHVEIRTTNGTVFKNGVGHSTVKPILKQGDKIVNATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFLNVSDGKQGPKGADGKTPYFHTAWSYSADGTDGFTTAYPNLNLLEGTKEFSGDWGFTRDWTNDGTFKGLTVKKRTYPWQGIFKTFTAPKDGKYTFSAYVKSSGDNVNIYRFVFLNGKDYWNAIKIIGNNFDWLRDSFTINLKANDTVIARYELSDKGSLWTAGHKWEEGSVATPWMPSANEVTTEDYPQYIGQYTNYMEVDSPNPQDYTWSLIRGNDGKQGPKGDRGIPGPKGEDGKTQYTHIAYADTISGSGFSQTDVNKPYIGMYQDFNAEDSKNPQDYRWSKWKGSDGKDGIPGPKGADGRTPYVHFAYADSADGRTGFSLTQTGSKRYLGVLTNFIKEDSTNPSDYTWNDTAGSVSVGGENLIINSAFPENLDNWGFWEPGLPNNNLHIAKHEFYYSGARNLFRLDNNGKEGVPAASKRFPVKRNTDYSFNIQTFATGNIKGLTIYFLGREANETDKAFTKVVHLKTHTGSPSVTQAVKWHLTFNSGDCDEGYIRIDNSGTTDGKTSTLFFAELDCYEGTTDRAWQASSKDLEEEIDTKADDVLTQAQLNRLNETNSIIKAELDAKASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVINIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1130 AA
molecular weight: 126784,92710 Da
isoelectric point:5,22233
aromaticity:0,12035
hydropathy:-0,59566

Domains

Domains [InterPro]
DC_0002
STR
2–610
DC_0002 DC_0002
IPR010572
ENZ
78–317
IPR010572 IPR008983 DC_1328 Coil
IPR008983
RBD
505–573
IPR008983
AZF91199.1
1 1130
Architecture
STR
STR 2-1130
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC1005
[NCBI] 		2365005 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF91199.1 [NCBI]
Genbank nucleotide accession
MH937483.1 [NCBI]
CDS location
range 16411 -> 19803
strand +
CDS
ATGTATGTGTCGTTTTACTACGATAATTCTTACCACGTTTTCTATGTGGCTAAGATTGTTGAGAATGATTTTAGTTTTCAAGTGACTTGTAATAATACCAACCTTGAATTGGCAATGGAAGTTGCACGACCACTTGCAGACAGTGGCGGTCCCAAAACTATTGAATGGTATCTTCAAAATCTTGAGTTGCTTGGTTTTGCAGGTCTGGAAATAGGTGTCAATGAAATTTCTGATAGAACAAGAACGCTTACTTTTGAATCTCAAAGTGGAACTAAACTAGAGCAACTTCATAGCTTGATGAATCAATTTGATGCAGAATTTATTTTCCGTACCGAATTAAACCGAGATGGTACTTTGAAAAAGTTTGTCATCGACATCTACCATCGTCCTGACAAAAACCATCACGGTATAGGTAAGGCTAGAGGAGACGTCGTTCTCTATTATCAAAGCGGCCTGAAAGGTGTTCAAGTTACAAGCGATAAAACACAACTGTTTAATGCTGGTGTTTTCACTGGTGCAGACGGTGTTAATCTTGATAGCGTTGAGTTTGAAGAAAAAAATGAGTTAGGACAAGTAGAGTTCTATTCTCGAAAGGGCACTAGCTTCGTTTTCGCCCCAATATCAAGAGAACGCTACCCATCTACCATGAATCCAGACAGCGCCGATAACTGGACACGTAAGGATTTTCAAACAGAATACAAGGACGTTGAATCCTTAAAAGCTTACGCCTTGCGTACTATCAAGCAGTATGCTTATCCACTATTGACTTACACAGTAGATGTTCAGTCTAGTTTTCTGGATAACTATAAAGACATCAATCTAGGTGATACCATCAAGATTGTGGATAACAATTTTAGAGGTGGCCTAGCCCTAGAAGCTCGTGTATCTGAAATGATAATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCATCGGATGCCTTACAACAACGCATCGATGAGATAGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACAAACGGTACAGTATTTAAAAACGGAGTTGGCCATTCTACTGTTAAACCCATCTTGAAACAAGGCGATAAAATCGTTAATGCAACTTATCGATTTGTGATTGATGGCACTATTAAATATTCGGGTATGACTTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTCTAAATGTTTCAGATGGGAAACAAGGTCCTAAAGGTGCCGATGGTAAAACACCTTATTTCCATACGGCATGGTCTTACAGTGCAGATGGTACCGATGGTTTCACGACTGCTTACCCTAATTTGAATTTGTTGGAAGGGACAAAAGAATTTAGTGGAGATTGGGGATTTACTCGGGATTGGACGAACGACGGAACCTTTAAAGGTTTAACTGTTAAGAAACGAACTTATCCATGGCAAGGTATATTCAAAACATTCACAGCACCTAAAGACGGAAAATACACTTTCTCAGCTTATGTTAAAAGTTCAGGTGATAATGTAAATATATATAGATTCGTTTTTTTAAATGGGAAAGATTATTGGAATGCTATTAAGATAATAGGAAACAATTTTGATTGGTTAAGAGATAGTTTCACTATAAATTTAAAAGCCAACGATACTGTCATTGCTAGATATGAATTATCGGATAAAGGTTCTTTATGGACTGCTGGTCATAAATGGGAAGAAGGTTCAGTAGCCACTCCATGGATGCCTTCAGCTAACGAAGTCACAACCGAAGACTATCCACAATACATTGGTCAGTACACAAACTATATGGAAGTAGATAGTCCTAATCCTCAAGACTACACATGGAGTTTGATTAGAGGAAACGATGGGAAACAAGGACCAAAAGGTGACCGTGGTATTCCCGGTCCTAAAGGAGAAGACGGTAAGACACAGTATACTCATATCGCTTACGCCGACACAATCTCAGGCAGTGGTTTTAGTCAAACAGATGTCAATAAACCATACATTGGAATGTACCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGACTATCGTTGGTCTAAATGGAAGGGTAGCGATGGTAAAGATGGTATTCCTGGTCCTAAAGGTGCGGACGGACGAACGCCTTACGTGCACTTCGCTTACGCAGATAGTGCAGATGGTAGAACTGGTTTCAGTTTGACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGTACTAATCCATCGGACTATACGTGGAATGACACGGCTGGCAGTGTTTCGGTTGGCGGTGAGAACCTAATCATTAACTCGGCTTTTCCAGAAAATCTTGACAATTGGGGATTTTGGGAACCGGGATTGCCTAACAATAATCTTCATATAGCTAAACATGAATTTTATTACAGTGGTGCAAGAAATCTATTTAGACTAGATAATAACGGCAAGGAGGGAGTTCCTGCTGCATCAAAACGTTTTCCAGTCAAACGAAATACTGATTACTCATTTAATATTCAGACTTTCGCTACTGGTAATATCAAGGGCTTAACTATCTATTTTTTGGGTCGGGAGGCGAATGAAACTGACAAGGCATTTACTAAAGTCGTGCATCTCAAAACACATACAGGTTCACCGTCAGTAACACAAGCTGTTAAATGGCACTTAACGTTTAATTCTGGTGATTGTGATGAAGGTTACATCCGTATAGACAACAGTGGAACGACTGACGGTAAAACTTCTACGCTATTTTTTGCAGAACTAGACTGCTATGAGGGAACCACTGACCGAGCGTGGCAAGCGTCGTCGAAAGATTTGGAAGAGGAAATAGACACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCGTCGCTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCAATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5aafe1a5702a86f851cb907eabd3c9eb99e1dc42cd7fb8d5398722537082d9d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank