Protein

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Genbank accession
XCO41988.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLLSSLLNQPKRNKNMALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIVFLSSPIQMAVVNKVVSDTEIKAITTSSAVVESTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKEFDFESLQNLANQIKADSEAAESSAEAAATSESNAKTSETKAKESENAAKSSEVAAETARDQVQQIINDAGEQSTLVALASHTLPGASKVALADGFLNDYIKEKTYESLGAKFDGINDDTAAIQAGNELVKQGYLVKAVTPNGRARITSQVTFYAGSGAVDMGTAYLKPDRNLMTTGYAARVIGDNTRTYNLGSRLIINMIGPYGEIGEKPPTDTSSITTQLCGLNIDPGTNTQVSNLDISWKIFGFMKNVRIGSKSVYLIRAWGPMHSKAWVCNVEFDCQDDAGENINFFGGTGSDCRNSEKTAADIYSTSAGHFLGLNLIGYSQDYNDVDLDINGGYVYKLAGQFENNSLQPYVKMSYTVGKRHPTVILQTVNIDGGNDQAQEAGNTGRPAWFKIGNGCIFHADGGTWGKYDKMHNTKLFDVSANGPIALSVKNIYFDTYDGVDSIEWGAHGNPIRNYDFSDHSLSGWKTEYTYPSGGAPVPPTITYDDSKPIGKAVKISSSVSNGGTTTLFGQKIPVTPGGILYMSTNLYWENIVTTNGTAYFGYTFYDAFGDEITHNNIGVNLNFQPANATAPVLCSGKVRIPSGAAFVHVGIRHYQMSGDVWMGKMNAFVQ
Physico‐chemical
properties
protein length:743 AA
molecular weight: 80085,41530 Da
isoelectric point:5,11633
aromaticity:0,09421
hydropathy:-0,26622

Domains

Domains [InterPro]
DC_0313
STR
2–737
DC_0313
G3DSA:2.60.120.260
STR
581–739
G3DSA:2.60.120.260
XCO41988.1
1 743
Architecture
STR
STR 2-739 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41988.1
1 743
Domain Start End Length (AA) Confidence
N-terminal 1 246 246 0,9851
Central domain 247 583 338 0,9946
C-terminal 584 743 159 0,9770
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-246
Central
247-583
C-terminal
584-743

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146057
[NCBI] 		3232235 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41988.1 [NCBI]
Genbank nucleotide accession
PP889505.1 [NCBI]
CDS location
range 19701 -> 21932
strand -
CDS
ATGCTATTATCTTCGTTACTCAACCAACCAAAGAGGAATAAAAACATGGCACTATACAGAGAAGGAAAAGCGGCTATGGCCGCCGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCATCGCTTTCGCTGATTCGCCCAGGCGCGACGATTGTGTTTTTATCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTCAGCGACACTGAAATTAAAGCAATTACCACAAGCAGCGCTGTCGTAGAGTCTACTGACTACGCGATCCTATTAAGTGACTCTCTGACCGTTGACGGTCTAGCGCAAGATGTTGCGGAAACTTTGCGCTACTATCAGTCGCAAGAAACGGTAATTGCGGATGCGGTCGAGTTCTTTAAGGAGTTCGATTTCGAATCGCTACAAAATCTTGCCAACCAAATTAAGGCAGACTCCGAAGCTGCGGAATCAAGCGCCGAGGCTGCGGCGACGTCTGAAAGTAATGCTAAAACTTCAGAGACTAAAGCCAAAGAGTCTGAAAATGCGGCAAAAAGTTCAGAGGTAGCAGCGGAGACTGCAAGAGACCAAGTACAGCAGATCATCAATGATGCTGGTGAGCAGTCAACGCTGGTTGCGCTTGCTTCACATACGTTGCCAGGAGCATCAAAAGTCGCTCTTGCTGACGGATTTCTGAACGACTACATAAAGGAAAAAACTTATGAGTCACTTGGTGCTAAATTCGATGGCATAAACGATGATACTGCGGCGATCCAGGCAGGAAACGAGCTTGTAAAGCAGGGTTATTTAGTAAAGGCAGTAACGCCAAACGGTAGGGCGAGGATTACTTCACAAGTAACATTTTATGCTGGTTCTGGAGCTGTTGACATGGGTACGGCTTATCTGAAGCCTGATAGGAATTTGATGACTACTGGCTATGCGGCAAGGGTTATTGGAGACAATACGAGAACATATAATCTTGGCAGCAGATTGATAATCAACATGATTGGCCCATATGGTGAAATAGGTGAAAAGCCACCTACTGACACCAGTAGTATTACTACGCAACTATGCGGCCTAAATATCGACCCAGGCACTAATACACAGGTATCTAATTTGGATATTAGTTGGAAGATCTTTGGATTCATGAAAAACGTAAGAATTGGGAGCAAGTCTGTATATTTGATTCGCGCATGGGGGCCAATGCATAGCAAAGCATGGGTTTGCAATGTTGAGTTTGACTGTCAAGATGACGCTGGAGAAAATATTAACTTCTTCGGCGGTACTGGTTCAGATTGCAGGAACTCTGAAAAAACTGCGGCTGATATCTATTCAACATCTGCAGGTCATTTTTTAGGACTGAATCTTATTGGTTATAGTCAGGATTATAATGATGTTGATTTAGACATCAACGGTGGGTACGTTTACAAATTAGCTGGTCAATTTGAAAATAACTCATTACAGCCTTATGTAAAAATGTCATATACTGTCGGTAAGCGACACCCAACTGTAATACTACAAACAGTTAATATTGATGGTGGTAATGACCAGGCGCAGGAGGCAGGAAACACTGGACGTCCTGCATGGTTTAAGATTGGTAATGGATGTATTTTTCATGCTGACGGTGGAACATGGGGTAAGTATGATAAAATGCACAATACAAAGTTATTTGATGTAAGCGCTAATGGGCCTATTGCACTTAGCGTAAAAAATATTTACTTCGATACTTATGACGGTGTTGATAGCATAGAATGGGGAGCGCACGGAAACCCGATTAGGAATTATGATTTTAGCGATCACTCATTATCTGGTTGGAAAACAGAATATACATACCCATCAGGTGGTGCACCAGTACCCCCGACGATAACGTATGACGATTCTAAGCCAATAGGAAAAGCAGTTAAAATTTCATCGTCAGTTAGCAACGGTGGAACAACGACGCTATTCGGTCAGAAGATACCAGTAACTCCTGGAGGCATACTTTACATGTCCACAAATCTTTATTGGGAAAATATAGTCACAACAAACGGCACAGCATATTTCGGATATACGTTCTATGATGCATTTGGTGATGAAATAACGCACAACAACATAGGTGTAAACTTGAATTTTCAGCCAGCAAACGCTACAGCACCAGTTTTGTGCTCTGGTAAGGTGCGCATTCCTTCTGGCGCGGCATTTGTGCATGTTGGAATTCGCCATTATCAGATGAGCGGAGATGTATGGATGGGTAAGATGAATGCATTTGTTCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
09d1b6baba0a90906b42cf75facc3dcb4349de5a3c65260b844745e49f7b3515
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank