Protein

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Genbank accession
CAH9015858.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANYDPTTPRSIPAVRAELDKIAAAIQTVLHRDGTAPNQMEADLDMNNNSILNAVTSDDPSSLVTKAYVDGGDAALDAAKVNRAGDTMTGNLSIPVPTQGNHAANADYVNAQIAGLEGAEGIVPLTVPRQQGDGVTVVFNSPATNQVPNNSLVVNIDGVTQRPFTDYTADAAGNVVFTSAPPLLSDIDVTLFEPVNLQEVADFSQVTATGSTTPRTLADRFADVVNVKDFGAVGDGVADDYQAFQDCALECLLREKSMYIPEATYLIGQRVILPFANSRGDLSCKIIGNKARLISGVAQENVSGSTHGCFVTGRYDGSALIPVTSGEEEYLTGNLSIEDLVIENFGEALRMHNAVYGSSLKNLYFNKCFNPIYLSRCFYLEQSNILMRGFVPALPASVGYRSLSFSNSMPASGIKVIGYERGFVLGGFDGGTIRDSTAESCDIGVDLAQESNMVTLDTMYLEGNTTNIRFAAVIRRLTISGSWLFGDGTNHFSSLLGNSDYTNLTLINNRIWGGIVNTPSIRNVFGEAIQCGDAGEPTNDMPMSGLPNVVRSFKNYGFTTTTSGYNSTVRCLDNAQESNLIPASWSGGRFRNGRDSDDRSPFQSVIDNGGSLEFTTSYDFDGNSMFHYSVNVAHSVGTFKVNALILYDNETDSYRAMQPTVGGFIESTDLVVDNNGGKVRIKLPVFTTPSLDYSIVRIV
Physico‐chemical
properties
protein length:699 AA
molecular weight: 75105,87580 Da
isoelectric point:4,57175
aromaticity:0,08441
hydropathy:-0,12232

Domains

Domains [InterPro]
DC_1795
STR
7–96
DC_1795 DC_1047
IPR012334
STR
200–594
IPR012334
IPR011050
STR
222–527
IPR011050 DC_2203
IPR024535
ENZ
225–273
IPR024535
CAH9015858.1
1 699
Architecture
STR
STR
RBD
STR 7-96 | STR 157-594 | RBD 595-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH9015858.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9917
Central domain 241 576 337 0,9792
C-terminal 577 699 122 0,9422
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-576
C-terminal
577-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 275E43-1
[NCBI] 		2963184 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH9015858.1 [NCBI]
Genbank nucleotide accession
OX241572.1 [NCBI]
CDS location
range 18966 -> 21065
strand +
CDS
ATGGCAAATTACGACCCAACAACCCCTCGCTCTATTCCGGCAGTGAGGGCTGAACTAGATAAGATTGCAGCAGCAATTCAAACTGTGTTACATCGCGATGGAACCGCTCCTAATCAAATGGAAGCTGACCTTGATATGAACAACAACAGTATCTTGAATGCTGTAACATCGGATGACCCATCAAGCCTCGTAACCAAGGCATATGTAGATGGAGGGGACGCTGCTCTGGACGCTGCTAAGGTCAACCGTGCTGGGGATACTATGACAGGAAATCTGTCGATTCCGGTGCCTACTCAGGGCAACCATGCTGCTAATGCAGATTACGTAAATGCTCAGATTGCAGGGCTAGAAGGTGCAGAAGGTATTGTACCTCTTACTGTTCCTAGACAACAAGGTGACGGGGTAACAGTTGTATTTAATTCTCCTGCTACCAACCAAGTACCTAATAACTCGCTAGTAGTTAACATTGACGGGGTCACACAACGTCCTTTTACGGACTATACCGCAGATGCGGCAGGTAATGTGGTTTTCACCTCTGCACCTCCGTTGCTCTCGGACATTGATGTTACGCTATTCGAACCGGTTAATCTGCAAGAAGTAGCTGACTTCTCTCAAGTAACAGCTACAGGTTCTACTACACCGCGTACTCTAGCAGATCGTTTTGCTGATGTGGTTAATGTTAAGGACTTTGGCGCTGTAGGAGACGGTGTTGCAGATGACTATCAGGCATTCCAAGATTGTGCTCTAGAATGTTTGCTTCGAGAAAAATCTATGTATATCCCTGAAGCTACTTACTTAATTGGGCAAAGGGTTATCCTCCCATTTGCTAATTCGCGGGGAGATCTCTCTTGTAAAATCATAGGCAATAAGGCCAGACTGATTAGCGGAGTTGCTCAAGAAAACGTGTCAGGCTCAACACACGGATGTTTTGTTACAGGGCGCTATGACGGTTCTGCTTTAATCCCTGTCACATCTGGGGAGGAAGAGTATTTGACTGGCAACTTATCTATAGAAGATTTAGTTATAGAAAACTTCGGTGAAGCGTTAAGAATGCATAATGCTGTATACGGGTCTTCTTTAAAAAACCTATATTTTAACAAATGTTTCAATCCTATTTATCTAAGCCGATGCTTTTACTTAGAACAGTCTAATATTCTAATGAGAGGTTTCGTTCCAGCACTCCCTGCCTCAGTAGGGTATCGTTCTCTAAGTTTCTCGAATTCAATGCCTGCTTCAGGGATAAAAGTGATAGGTTATGAACGAGGATTCGTGCTTGGAGGTTTCGATGGTGGTACAATCAGAGACTCTACTGCGGAGAGTTGTGATATAGGCGTAGATCTTGCACAAGAATCTAACATGGTGACTTTAGATACTATGTATTTAGAGGGTAATACTACTAACATACGCTTTGCAGCGGTAATCAGACGTCTTACAATATCAGGGTCTTGGTTATTTGGTGATGGAACTAACCACTTCTCATCTCTCTTGGGGAACAGTGATTACACGAATCTTACCTTGATTAATAACCGTATATGGGGCGGTATCGTAAATACACCTTCAATACGTAATGTATTTGGAGAAGCTATACAGTGTGGCGATGCAGGAGAGCCTACAAATGACATGCCAATGTCTGGTCTTCCAAATGTAGTGAGAAGTTTTAAGAATTACGGGTTTACTACTACTACGTCCGGGTATAATAGCACGGTACGTTGTCTAGATAACGCTCAAGAATCAAACCTAATTCCGGCCTCATGGTCTGGTGGCAGATTTAGAAACGGAAGAGATTCCGATGACAGGAGCCCTTTCCAGTCTGTTATAGATAATGGGGGCAGCCTTGAGTTTACAACTTCATACGATTTCGATGGTAACTCTATGTTCCATTACAGTGTCAATGTAGCTCATTCAGTTGGGACATTTAAAGTCAATGCTTTAATCCTGTATGACAATGAGACAGATTCGTATAGAGCAATGCAACCAACTGTAGGAGGTTTTATTGAGAGTACAGACTTGGTTGTAGACAATAACGGTGGGAAAGTTAGGATTAAACTCCCTGTATTTACAACTCCAAGCTTAGACTATTCAATAGTCAGAATAGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e9fc761ab619fcb1a9d9c9686784cc7567b105f846c2aaa7c0fc5f4c9ee9e7cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6879
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50