Protein

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Genbank accession
BFM93900.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYQLVSAIAQLKAAGTAWAAVDLSTLTLAEIDSGYTDAYLRVSSPFWTKDQTMRFGEITKGFADRTQTLAGFFAAQGNTTLPSTDGLASIATGQIKYADAVWAGYKLDRGKYSTSPTTIPDPDDADVLLMSKPGVDARVFYKNCLVSINGLIHRTDADSTYVYVIDAAKSNYLSRRNEVGILNFRDVGELTFVPITADMLFKAHPDQPFANQIFIKSPVSAEGKTCALVMGGYLFLLDNTSFFRTAEDIFCLDTQTVALLDRFYESRELIDLSPLGLDYNGAHDMQISRAQLFSDEVLTKWMTLSQSFLVFIDSPNVVVERTQIAPTQLAKQYLTYEEPTLPMLGGFGLLWPYWPQEDDGVWSLSVGDNIYSHRLYHTTPPEEAPMPADNRRPIGRESYSYAYFLNIESEKIVITPNT
Physico‐chemical
properties
protein length:418 AA
molecular weight: 46578,09820 Da
isoelectric point:4,70680
aromaticity:0,11722
hydropathy:-0,12081

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BFM93900.1
1 418
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,2857
Central domain 23 221 200 0,5305
C-terminal 222 418 196 0,6149
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-221
C-terminal
222-418

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage FLC4-3B
[NCBI] 		3157663 Viruses > unclassified bacterial viruses >
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM93900.1 [NCBI]
Genbank nucleotide accession
LC819007 [NCBI]
CDS location
range 80309 -> 81565
strand -
CDS
ATGTATCAACTGGTCTCTGCGATTGCGCAACTCAAGGCGGCCGGTACGGCTTGGGCTGCGGTAGATCTGAGTACCCTCACGCTGGCGGAAATCGACAGCGGGTACACAGATGCCTATCTGCGGGTCTCCAGTCCTTTCTGGACGAAAGACCAAACGATGCGCTTTGGGGAAATCACCAAAGGCTTTGCCGACCGGACTCAAACACTCGCCGGGTTTTTCGCAGCGCAGGGTAACACCACGCTGCCTTCGACCGACGGCCTGGCGAGCATCGCCACCGGGCAGATCAAGTACGCTGATGCAGTGTGGGCCGGGTATAAGTTGGATCGGGGCAAGTACAGTACCAGCCCGACCACGATTCCCGATCCGGACGACGCAGACGTACTCCTGATGTCTAAGCCCGGAGTGGACGCCCGCGTTTTCTATAAGAATTGCTTGGTCTCCATCAACGGACTGATTCACCGCACCGATGCGGACAGCACTTACGTCTACGTGATCGATGCGGCCAAGAGCAATTACCTCAGCCGGCGCAACGAAGTGGGGATTCTCAACTTCCGCGATGTCGGGGAACTCACCTTCGTGCCGATCACAGCAGACATGCTGTTCAAGGCCCATCCGGATCAACCCTTTGCCAATCAGATCTTTATCAAGAGCCCGGTTTCGGCAGAAGGCAAGACCTGTGCGCTGGTGATGGGTGGGTATCTGTTCCTGCTCGACAACACTTCCTTCTTCCGCACCGCGGAGGACATCTTCTGCCTGGATACCCAGACAGTGGCGCTACTCGATCGTTTCTACGAATCGCGCGAGCTCATCGATCTGTCACCACTGGGCCTGGATTACAACGGCGCCCACGACATGCAGATCTCCCGGGCTCAGTTGTTCAGCGACGAAGTGCTGACCAAGTGGATGACCCTCTCGCAAAGCTTCCTGGTCTTTATCGACAGCCCCAACGTAGTGGTGGAGCGCACCCAGATTGCGCCGACCCAGCTCGCCAAACAGTACCTGACCTACGAAGAACCGACCCTGCCGATGCTGGGTGGTTTCGGTTTGCTCTGGCCGTACTGGCCGCAAGAGGACGACGGCGTGTGGTCTCTCTCGGTAGGCGACAATATCTACAGCCATCGCCTGTACCATACAACGCCCCCTGAGGAGGCGCCGATGCCTGCGGATAACCGTCGGCCCATTGGTCGGGAATCGTACAGCTACGCATACTTCTTGAACATCGAGTCCGAGAAGATTGTGATCACGCCCAACACTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6e29a36231376810eebe4ca1354267eae75d9dbafd50ff0cf1faad9f6a76b7dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2661
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2024-08-09 — GenBank