Protein

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Genbank accession
XWX34658.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MVVKYDIGEDELVLHLRYGKYITGFTVYGGYSEENGQVKVKREILPPYFFDDFAVSKYLYYAKPEEVIENKDYIPPNYGSVEDETSNPPVEETVSKEEYDKLKEEMDEIKKLLEQLMKQKG
Physico‐chemical
properties
protein length:121 AA
molecular weight: 14193,82870 Da
isoelectric point:4,61921
aromaticity:0,13223
hydropathy:-0,75372

Domains

Domains [InterPro]
DC_0295
STR
4–121
DC_0295
IPR021358
STR
20–76
IPR021358 Coil
XWX34658.1
1 121
Architecture
STR
STR 4-121
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_64
[NCBI] 		2815632 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus succinus
[NCBI] 		61015 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX34658.1 [NCBI]
Genbank nucleotide accession
MZ417340.1 [NCBI]
CDS location
range 103395 -> 103760
strand -
CDS
ATGGTAGTAAAATACGATATAGGTGAAGATGAATTAGTTTTACACTTAAGATATGGTAAATATATAACAGGGTTTACTGTCTACGGAGGTTACTCAGAAGAAAACGGACAAGTTAAAGTAAAGAGAGAGATTTTACCTCCTTACTTTTTTGATGACTTTGCTGTCAGTAAGTACCTATACTACGCAAAACCGGAAGAAGTTATAGAAAATAAAGACTATATTCCCCCTAATTACGGTAGTGTAGAAGATGAGACAAGTAACCCTCCAGTTGAAGAAACAGTATCTAAAGAAGAATACGATAAGTTAAAAGAAGAAATGGATGAAATTAAAAAACTTCTAGAACAATTAATGAAACAAAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97de2365c45a94d826ccc458aca2e0a2a389f6ba0958914ece85caef463796b8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank