Protein

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Genbank accession
AAY46290.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSKSGSVIINSLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRAKFSSVRRFYAVQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCCDMIGAVMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQYVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGGGWEGYYVRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 88821,30320 Da
isoelectric point:5,19522
aromaticity:0,12594
hydropathy:-0,29736

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
AAY46290.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAY46290.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9894
Central domain 148 348 202 0,1170
C-terminal 349 794 445 0,1486
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP4
[NCBI] 		329886 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Chatterjeevirus
Host Vibrio
[NCBI] 		662 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAY46290.1 [NCBI]
Genbank nucleotide accession
DQ029335 [NCBI]
CDS location
range 23412 -> 25796
strand +
CDS
ATGGCTCTTATCAGTCAAAGCATTAAGAACCTTAAAGGAGGTATCAGTCAACAACCTGATATCTTACGGTATTCCGACCAAGGTTCCAAACAGATTAATGGTTTCTCTTCAGAGGTAGAAGGTCTTCAAAAGAGACCTCCCTCAGTTCACATAAAGAGATTAACCGACCAGTTTGGCTTAGGACAAAAGCCTTATTGTCATATCATTAACCGTGATGAAGTAGAACGTTATGCAGTGTTCTTCACAGGTTCAAACATTCGGGTATTCGATTTGTTTACTGGTGATGAGAAGACTGTGAACGCTCCTAACGGTTTATCTTACGTGAGTTCTTCTAACCCTCGTAAAGACCTTCGTATGGTGACTGTAGCTGATTATACGTTCATTCTTAACCGCAACGTAGCAACTGCTCAAGGAACAACTAACACTCCAAGTGGTCTGGCTCCATTCGGTCACTTTGGTCTTGTGGTAATCCGTGGTGGTCAATATGGGCGTACCTATCGCATCAAAGTTAACGGAAGCGTAGAGGCATCATTTGAGACTCCTTTAGGAGACCAAGTGGCTCATGCTAAACAGATTGATATCGCGTACATTATTGACCAGTTAGCCGCTGGTTTAATCAACAAAGGATGGGCTGTAACTAAAGGTTCAGGTTATTTCTATTTCTCAAAGAGTGGTTCTGTTATCATTAACTCACTTGAAGTAGAAGATGGTTACAATGGTCAGTTGGCTTGGGGTATCATTAACGATGTTCAGAAAACTACTCAGCTACCAGTCTATGCGCCAAACAACTACATTATCCGAGTGTCTGGAGACCCTACGTTAAATCAGGATGATTACTACGTTAGGTTTGATGCTTCTCGTAACGTATGGACTGAATGTCCTGCTCCTAATATCAAAGCGGATTATAACAAGGCTACCATGCCTCATGTGTTGATTCGTGAAGCTGACGGTACGTTTACCTTCAAACAAGCTGATTGGACTCATAGAGCTGCTGGTGATGACGAGACGAACCCTTATCCATCATTCATTGGGAATAGCATTAACGATATCTTCTTCTTCCGTAACCGTTTAGGGTTCCTAAGTGGAGAGAATGTTATCCTTTCAGGTTCCGGTAATTACTTCAACTTCTTCCCTGAGTCAGTCGCGGTGTTAACTGATACAGACCCAATTGACGTAGCTGTAAGTACAAACCGAATCTCAATCCTGAAGTATGCTGTACCATTCTCAGAGGAGTTAATCCTGTGGTCTGACCAAGCTCAGTTCGTATTAAGTTCTGATGGAGGTCTTACACCAACGACTATACGATTAGACTTAACGACTGAATTTGAAGTTACCGAACAGGCTCGTCCATATGGTATTGGCCGTGGTGTTTACTTCGTGTCACCTCGTGCTAAGTTCAGCTCTGTACGTCGATTCTATGCGGTTCAGGATGTTACCCAAGTTAAGAACGCTGAGGATATTTCAGCACATGTTCCTTATTATGTTGAGAACGGTGTATTCAAAATGTCCGGTAGTTCCACTGAGAACTTCTTAACGATTCTGACTGAAGGTAATGAGCAACGAGTTTACTTCTACAAGTTCCTCTATCTGCAAGAACAGTTAGTTCAACAATCATGGTCTCATTGGGACTTTGGCGTGAACTGTCGAGTTCTGTGTTGTGATATGATTGGTGCTGTGATGCATCTCATTATTGATAGTCCGTCAGGTGTTCTTATGGAGAAGATTGAGTTTACTCAGAATACGAAAGACTACCCAGATGAACCTTATCGTCTGTACGTTGACCGTAAGATTGAGTACACGTTTCCTGAAGGTTCCTACAATGATGATGACTTTAAGACTCGTGTGAAACTCAAGGATATCTATGGTTCAACTCCTGCAAACGGACAATACGTGTTTATTTCACTTGGTGGAGTTACTTTCACGTTTGACCCTCCTGCTGGTGGATGGCAAGCTAATGATGGTCTGATTGAGTTCGATGGGGATTTACGTGGTACTAAGTTCTTCGTGGGAGAAGCTTATACGTTCCTCTATGAGTTCTCAAAGTTCCTCATTAAGACAACCGATACTGCTGATGGTGTAGCTACTGAAGATATCGGTAGGTTGCAACTTCGTCGTGCTTGGGTTAACTATGATAAGTCAGGTAACTTCCGTGTCGAAGTGAACAACCAAGGTCGAACCTTCACGTATAACATGACAGGGAACCGTTTGTCTACCAATGAGCTTATCCTTGGAGATGAGTCTCTGGATACAGGTCAGTTCCGTTATGCGGTGTCTGGTAATGCAACTCAAGTAACCGTAAGTCTCATCTCAGATACTCCTAATCCATTGTCTATCATCGGTGGAGGCTGGGAGGGATACTATGTGAGACGTTCATCTGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88ec5eeec0be7f2c7579e1cc4e7a14d52d7f9e6a4e55440a25b499715c699d84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50