Protein

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Genbank accession
XWX32456.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKYVNVKQDGYLGININNDTRVINGYMLSGGVGEQDIVIHESVLPSNFYDEFIVGKFKYYRETGEVIEDYNFIPPENDNMMEEEPETVSKEEFDNLKSQFDAMQKLLEQLIGGK
Physico‐chemical
properties
protein length:114 AA
molecular weight: 13155,55730 Da
isoelectric point:4,31649
aromaticity:0,11404
hydropathy:-0,57456

Domains

Domains [InterPro]
DC_0295
STR
2–114
DC_0295
IPR021358
STR
14–75
IPR021358
XWX32456.1
1 114
Architecture
STR
STR 2-114
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_31
[NCBI] 		2815623 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX32456.1 [NCBI]
Genbank nucleotide accession
MZ417329.1 [NCBI]
CDS location
range 4241 -> 4585
strand -
CDS
TTGAAATATGTAAATGTAAAACAAGATGGATATTTAGGTATAAACATTAATAACGACACTAGAGTAATAAACGGTTATATGTTATCCGGTGGTGTAGGTGAGCAAGACATAGTTATTCATGAAAGTGTCTTGCCTTCTAATTTCTACGATGAATTTATTGTAGGTAAGTTTAAATATTATAGAGAGACGGGAGAAGTTATAGAAGACTATAACTTTATCCCTCCTGAAAATGATAATATGATGGAAGAAGAACCGGAAACAGTATCTAAAGAAGAATTTGATAACTTAAAAAGTCAATTTGATGCTATGCAGAAATTGCTAGAGCAACTAATAGGAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c197e5ade9d4e763459f0ed1f192cb2aa09c67d31249904420eebec2ced29c8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8002
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank