Protein

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Genbank accession
XYM57231.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADRFPLIVNATSRKIEELVAGDNLDLTGNGISISGNTGTTGQYLKVDSGIVAWDNPGDVYLTLTQTVTNKTFETCVISGANNTITNLPNSALSNSSITVNGTQVALGGSLTLSDTDTTFALSAADGSTSLRKQINLTDSLGNIDEVIFEVGTPSSVPAGSNALSLELSRTNNIITIAGSVVDSDTITTIAASSGGTAQTGAMLFSGTGGATVSQDAATRTININSLNDDTITRLRSGSGGTYADGDFTFLAGSEVSIVQAPNGTTGDPEITISSVDTITRLKGGNAGSLVSGDVTITGGGGGNVTVAQSGTTITIDSQNDDTITKVASGSEVLASGNFRFKQAGATTVTQTTNSLTGEIEIEISSANTDTGASLTAGEGLILASGTEYSVKNASNLIDNRVSKWDNGNSQFANSIITDDGSTVTINGDFAVTGTNTIIETTTLAVEDNLVELRRGASLTGSDGGIQINRTTDATGAVATFNRLEWYEAGAYWRSLDNGGIAKRFVTETETQTLTNKTLTSPTLTNPTIGTATATTVNGLAITATASSTLTMADLKTFSVNNTMTLNATDGSTVNFGTGGGAGATVAYSSNTLGSFATTTSTQLRGVVSDSTGTGSLVFSTNPVINTTITTSSTTFSVFNTSALTVNAFGAATALNMGSSSGTTTINNGLTVANNVTLNTTVADSVTINGRTDFVNADITIRDAGGFGISIGRGGGEVQTNTRVGYAALNANQSGIEDAAFGYSALQSCTAGSKNSAFGHRALANLEDGDDNTAVGKDALYQHIDGEGNVAVGRSSLENNTVGDYNVCLGYFAGYAQTGSGNVLIGPASTGNSTSATYAAPSAGGSNQLIIGSGTGTWVSGDSGFNLTVPNDFRVNGTATIDGDLVVQGTTTSINSAVIQVDDKSIELAAVTNQTFTADFTNGSAQITNISPVAGLIEGMTITIPSGGVSVPVDTYIVIFDGTTGTATLSNAVTGTTGDATFIATGPTDLGASGGGIILKGTPIGSGGTGDKTLLYDHSRTDKYWTASENFELAAGKKYAIGNQLIIDSTSLGNSVVNSSLTSVGTLTSLSVDGPVVLGGRAVEKVFSSFATNFSVSSNTISISTAPANTIVGTTPTQAINTWSFTTADPGGNTLANGESITITLIVDANTAAIYGDDCEVDGVAITNGVKWSGGSPPTATTNTDILTFIIVKDSSGVVQVFGQGTTDFS
Physico‐chemical
properties
protein length:1210 AA
molecular weight: 122299,25980 Da
isoelectric point:4,16734
aromaticity:0,05455
hydropathy:0,00711

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH11
[NCBI] 		3413211 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57231.1 [NCBI]
Genbank nucleotide accession
PV340848 [NCBI]
CDS location
range 181634 -> 185266
strand -
CDS
ATGGCAGATCGTTTTCCACTAATTGTTAATGCTACAAGTAGAAAGATCGAAGAACTTGTAGCTGGAGACAATTTGGACCTCACGGGTAATGGTATTTCCATTAGCGGAAACACTGGTACGACTGGTCAGTACCTGAAGGTTGACTCTGGAATCGTTGCTTGGGACAATCCTGGTGATGTATACCTGACACTGACGCAAACAGTTACAAACAAAACATTTGAAACTTGTGTTATCTCTGGTGCAAACAATACTATAACCAACTTACCCAATAGTGCGTTATCAAATAGTTCCATCACAGTCAATGGAACCCAAGTAGCACTAGGTGGTAGTCTCACGCTATCAGATACTGATACTACATTTGCTTTGTCGGCTGCTGATGGATCTACGTCACTCAGAAAGCAGATCAATCTAACTGATAGTCTTGGTAATATCGATGAAGTTATTTTTGAAGTAGGTACACCATCAAGTGTTCCTGCTGGTTCTAATGCTCTATCACTAGAACTGAGTAGAACTAATAACATTATCACCATTGCTGGTAGTGTAGTTGATAGCGATACTATCACCACGATTGCTGCTTCATCTGGTGGTACTGCACAGACTGGAGCAATGCTATTCAGTGGCACTGGTGGAGCAACTGTCAGTCAAGATGCTGCAACCAGAACCATCAACATCAACTCACTAAATGATGATACGATCACCAGACTTAGAAGTGGATCTGGTGGAACATATGCAGATGGAGACTTTACATTCCTAGCAGGAAGTGAAGTCAGTATTGTTCAGGCACCCAATGGAACTACTGGTGACCCCGAAATTACAATCTCCTCTGTTGATACTATTACAAGACTCAAAGGTGGAAATGCTGGATCTCTTGTCAGTGGTGATGTCACAATCACTGGTGGTGGTGGAGGCAACGTAACAGTTGCACAAAGTGGAACAACTATCACTATCGATTCACAGAATGATGATACCATCACAAAAGTTGCATCTGGTTCTGAAGTTCTAGCATCTGGAAACTTCCGCTTCAAGCAAGCAGGTGCTACAACAGTCACACAAACAACTAACTCACTTACAGGTGAGATTGAAATTGAAATTAGTTCTGCTAACACTGATACTGGTGCAAGTCTTACTGCTGGTGAAGGTCTAATTCTTGCGTCTGGAACCGAATACTCAGTCAAGAATGCTAGTAACCTTATTGATAACCGAGTTTCCAAGTGGGATAATGGAAACTCTCAGTTTGCAAACAGCATCATCACCGATGATGGTAGTACAGTAACAATCAATGGTGACTTTGCAGTCACTGGTACTAACACCATCATTGAAACTACCACACTGGCAGTTGAAGATAACCTAGTTGAATTGAGAAGAGGTGCAAGTCTCACTGGTTCTGATGGTGGTATTCAGATCAATAGAACTACTGATGCAACTGGAGCAGTAGCAACATTCAATAGACTAGAGTGGTATGAAGCAGGTGCATACTGGAGATCACTTGATAATGGTGGTATCGCAAAACGTTTTGTCACTGAAACAGAGACTCAAACTCTTACAAACAAAACTCTCACCTCACCAACACTAACCAATCCCACAATTGGAACTGCAACTGCGACCACAGTCAATGGTCTTGCTATCACAGCAACAGCAAGTTCCACTTTAACAATGGCAGACCTGAAGACATTCAGTGTCAACAACACCATGACATTGAATGCTACCGATGGTAGTACAGTTAACTTCGGTACTGGTGGTGGCGCTGGTGCAACAGTTGCTTACTCTTCCAACACTCTTGGTTCGTTCGCAACAACAACTTCTACTCAGTTGAGAGGTGTTGTATCTGATAGTACAGGTACTGGTTCTTTGGTCTTCTCTACCAACCCAGTAATCAACACAACAATTACAACCAGCAGCACAACATTTAGTGTCTTCAATACATCAGCACTAACAGTCAATGCATTCGGTGCTGCTACTGCCCTCAACATGGGTTCTAGCAGTGGCACAACAACAATCAACAATGGATTGACTGTTGCTAACAATGTAACCCTCAACACAACTGTTGCTGACTCGGTAACAATTAATGGAAGAACTGACTTCGTAAATGCAGACATCACAATTAGAGATGCTGGTGGTTTCGGTATCTCTATTGGTAGAGGTGGCGGTGAAGTACAAACCAATACCAGAGTCGGTTATGCAGCACTGAATGCTAACCAATCTGGTATTGAAGATGCTGCCTTTGGATACTCGGCACTTCAATCTTGTACTGCAGGATCAAAGAACTCTGCCTTCGGACATAGAGCTCTTGCAAACCTAGAGGATGGAGATGATAACACAGCGGTCGGTAAAGATGCTCTCTATCAACATATTGATGGAGAAGGTAACGTTGCTGTTGGTAGATCTTCTCTAGAGAACAACACAGTTGGAGACTACAACGTATGTTTGGGTTACTTCGCTGGTTATGCACAGACAGGTAGCGGCAACGTTCTAATCGGTCCTGCATCTACTGGTAACTCTACAAGTGCAACCTATGCAGCACCATCTGCTGGAGGAAGCAACCAGTTGATCATTGGATCTGGTACTGGCACATGGGTTAGTGGTGATAGTGGATTCAATCTAACTGTACCTAATGACTTTAGAGTCAATGGTACAGCAACAATCGATGGAGATTTGGTAGTCCAAGGAACCACCACCAGCATTAACTCTGCTGTCATTCAGGTGGATGACAAATCAATTGAACTTGCTGCTGTTACGAACCAAACATTTACAGCAGACTTCACCAATGGTAGTGCTCAAATTACTAACATCAGTCCTGTTGCTGGTCTGATTGAAGGTATGACAATCACCATTCCTAGTGGTGGTGTTTCGGTTCCAGTAGATACTTACATTGTTATCTTTGATGGTACTACAGGAACAGCAACTCTATCTAACGCTGTTACTGGAACCACTGGAGACGCAACCTTTATTGCTACTGGTCCTACTGATCTCGGTGCATCTGGTGGTGGTATCATTCTTAAGGGAACACCTATTGGATCTGGAGGTACTGGAGACAAGACTCTACTCTATGATCACAGCAGAACAGATAAGTATTGGACAGCTTCTGAAAACTTTGAACTTGCTGCTGGTAAGAAGTATGCTATCGGCAACCAGTTGATTATTGATTCGACATCTCTTGGTAATAGTGTTGTCAATTCTTCACTAACATCTGTCGGCACACTAACCAGTCTGAGTGTTGATGGTCCTGTTGTCCTTGGTGGTCGTGCAGTTGAAAAAGTATTCTCTTCTTTCGCAACTAACTTTAGCGTAAGCAGCAACACAATTTCTATCTCCACAGCACCTGCTAATACAATCGTTGGCACAACTCCAACACAAGCAATCAACACATGGTCGTTTACTACTGCTGATCCTGGTGGTAACACACTTGCTAATGGAGAATCCATTACAATCACACTGATTGTAGATGCAAATACCGCTGCTATATATGGTGACGACTGCGAAGTTGATGGTGTAGCAATCACCAATGGTGTCAAGTGGTCTGGTGGTTCTCCACCAACCGCAACAACTAATACTGATATTCTTACCTTTATTATTGTCAAGGATAGCTCTGGAGTAGTCCAGGTATTCGGACAAGGTACAACAGACTTTAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d001c85e8bafa1aa9e6230809290db07d9b9b526bb6a1fe4638976e9c769db5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50