Protein

View in Explore
Genbank accession
YP_009798358.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTENAMNYFKTPDNSNDPLAKNYYGNPDNSDGVDYTKITLEDLGFTVDAVKNQLTGMEEDLSDQVTGEPYQDSYYQAFMEQAVAMAEKEFDIVIRPRLDYDRLDFYRGDFDSFMYVRTYERPILHVKQVKMYLNDQTILDYPDRWVKVTNRLGQIELQPSLLAGGFNASMQVPYLSISGYPFGVPPVSQDQFSPQMLGVSYIAGMIPQPEDQHGINRDYYPHPDLIAYCAKYAAIEVLERWGRTVIGAGIAGFDVSIDGISTNVNSTQSAENTAATADIKLMQADMKHIKNTLMEYYGGRNIGFIA
Physico‐chemical
properties
protein length:307 AA
molecular weight: 34655,45590 Da
isoelectric point:4,50520
aromaticity:0,11726
hydropathy:-0,40586

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Semele
[NCBI] 		2079433 Uroviricota > Caudoviricetes > Herelleviridae > Harbinvirus semele >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009798358.1 [NCBI]
Genbank nucleotide accession
NC_047926.1 [NCBI]
CDS location
range 11231 -> 12154
strand +
CDS
ATGAGTACAGAGAATGCCATGAATTATTTTAAGACACCAGATAACTCTAATGACCCCTTAGCTAAAAACTATTATGGTAACCCAGATAACTCTGATGGAGTTGACTATACTAAGATTACATTAGAAGATTTAGGGTTTACTGTAGATGCAGTTAAAAATCAGTTAACAGGTATGGAAGAAGATTTATCTGACCAAGTAACTGGAGAACCATACCAAGATTCTTACTATCAAGCATTTATGGAACAAGCGGTTGCTATGGCTGAAAAGGAATTTGATATTGTTATTCGTCCTAGGCTTGACTATGATAGGCTTGATTTTTATCGGGGCGACTTCGATTCTTTTATGTATGTTAGAACTTATGAGCGTCCCATTTTGCATGTTAAGCAGGTTAAAATGTATTTGAATGACCAAACTATTCTCGACTATCCAGATAGGTGGGTAAAAGTAACTAATCGTTTAGGGCAAATTGAATTACAGCCTAGTCTATTAGCTGGTGGTTTTAATGCAAGTATGCAAGTGCCCTATTTATCAATATCAGGATATCCTTTTGGTGTACCACCAGTATCACAGGACCAATTTTCCCCACAAATGTTAGGTGTTAGTTATATTGCTGGTATGATTCCACAACCAGAAGACCAACACGGAATAAACAGGGATTATTATCCTCATCCCGACTTGATTGCTTATTGTGCAAAGTATGCCGCAATTGAAGTTCTTGAACGCTGGGGTCGTACCGTTATTGGGGCTGGTATTGCTGGTTTCGATGTAAGTATAGATGGAATTAGCACAAATGTCAATAGTACTCAGTCTGCTGAAAATACAGCTGCTACAGCCGATATTAAGCTAATGCAAGCAGATATGAAGCATATTAAGAACACTCTAATGGAGTATTATGGTGGTAGAAATATTGGGTTTATTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8c6fd7f254f7a0a98129c18329bc6335c6d7444eeb8b02ae3adef301c6bbe27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7120
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lactobacillus phages that infect wine-derived L. plantarum strains Kyrkou,I. and Hestbjerg Hansen,L. 2018-12-03 — GenBank