Protein

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Genbank accession
QVV99980.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MTIKSTSINVRGLTSGKISDISIVSKLVGQNLNITKNLITFTPLLEKPLIKILPFGDSFTDNGDSNRLANGSYSISTAGYWGCTWALTKQDFEMLDGKGVTGNTTTDLLNRITDATLSEADVVLLLCGTNDLNAGRSPESARDGMQQILDQLITAGKKILLVPVAYRRASDGLNTKIDTLNEYYKLLAEERKTHVVIASSSSLFNSLSEADSRQVTTDGLHPTGYGAILIAKEVVKTLDKYFISEQTNRTNYAPNPTFSGTSGTLLSGATGTVPNDWRVYFGDPTNDGVGTGVGSTVNNDGSVTLRTGNNTSISNGTRVLLRTGDIIIPQGGKWRYELEVDCESMGNATEHKIYITSNDVNVGIVEFQGSRFTSEVKFEKFKMKTPYIDVKTATKLQVYYQIVTSGGGSITATVRNPRLVKQTE
Physico‐chemical
properties
protein length:424 AA
molecular weight: 45964,23440 Da
isoelectric point:6,85725
aromaticity:0,07075
hydropathy:-0,25873

Domains

Domains [InterPro]
IPR051532
Unmapped
15–241
IPR051532 DC_2046
IPR036514
STR
38–250
IPR036514
SSF52266
STR
40–238
SSF52266
IPR036514
STR
50–250
IPR036514
cd00229
ENZ
52–236
cd00229
IPR013830
ENZ
55–226
IPR013830
QVV99980.1
1 424
Architecture
STR
RBD
STR 38-250 | RBD 251-423 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVV99980.1
1 424
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9894
Central domain 48 246 200 0,2357
C-terminal 247 424 177 0,9853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-246
C-terminal
247-424

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ICP1
[NCBI] 		979525 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae O1
[NCBI] 		127906 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVV99980.1 [NCBI]
Genbank nucleotide accession
MW794153 [NCBI]
CDS location
range 61018 -> 62292
strand -
CDS
ATGACTATTAAATCAACCAGCATTAACGTTAGAGGTTTAACATCAGGGAAGATATCAGATATAAGTATTGTCAGTAAGTTAGTAGGTCAAAACTTAAACATTACCAAAAACCTTATAACTTTTACCCCACTACTAGAGAAACCTTTAATAAAAATCTTACCTTTTGGAGACTCCTTCACAGATAATGGTGACTCCAATCGATTAGCTAATGGAAGTTATAGTATATCTACAGCAGGTTATTGGGGTTGTACTTGGGCACTAACCAAACAAGATTTCGAAATGCTTGACGGGAAAGGTGTTACAGGTAACACAACCACAGACCTGCTAAACCGCATAACCGATGCGACATTATCCGAAGCTGATGTAGTTTTACTTCTTTGTGGAACTAACGACCTGAATGCAGGTAGAAGTCCTGAATCAGCAAGAGATGGTATGCAACAGATACTCGATCAGTTGATAACTGCAGGTAAGAAAATCTTACTTGTACCTGTTGCTTATCGGAGAGCATCTGACGGTTTAAATACTAAAATAGATACTCTGAACGAGTATTATAAGTTGTTAGCCGAGGAAAGAAAAACTCATGTTGTAATCGCATCCTCTTCTAGCTTATTCAACTCTTTATCCGAAGCAGATAGTCGTCAAGTTACTACAGACGGATTACACCCAACTGGTTATGGCGCTATTCTTATTGCCAAAGAAGTTGTTAAAACATTGGATAAATATTTTATTAGCGAACAAACTAATAGAACCAACTACGCCCCTAACCCAACATTTAGTGGTACATCTGGTACACTATTAAGTGGTGCGACAGGTACGGTACCTAACGATTGGAGGGTTTACTTCGGAGATCCAACCAATGATGGCGTGGGTACAGGTGTAGGTAGTACAGTAAACAACGACGGCAGTGTAACTTTACGTACAGGGAACAACACTTCTATTTCTAACGGAACAAGAGTTTTACTAAGAACAGGTGATATCATTATCCCTCAAGGTGGTAAATGGCGGTATGAATTAGAGGTTGACTGTGAAAGTATGGGTAATGCAACAGAGCATAAGATATACATCACATCGAATGATGTTAATGTTGGGATAGTTGAGTTTCAAGGTAGCAGATTTACCTCTGAGGTGAAATTTGAAAAATTCAAAATGAAAACACCTTACATTGATGTGAAGACCGCAACTAAACTACAGGTTTACTATCAAATCGTAACTTCTGGTGGAGGTAGTATAACAGCCACCGTAAGAAACCCAAGGTTAGTAAAACAGACTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2080f5958df5305a73140760552560837f78dc5d8ec558c555d127eb14ee9822
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8049
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50