Protein

View in Explore
Genbank accession
AXH71336.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,73
Protein sequence
MRIDSSGSVGIGNTVPGDFNSQARNLVIGGGSGDTGMTIYSGSGSGDTGNIFFADGTSGSDPVRGGITYNHGDNSMNFRTNDGANRIYISSSGNVGIAEASPQTTLHVDGTGALFEGMSIDTNLSNVTSSFSRQNTGFNYRTTEGLNVTTNSNASASLNRKSDGRILDFFKNDTRKGSISIDDNGISISLGGTGTANTLDDYEEGTWTPAVNGASGFSTGITSSSNSKYVKIGNIVTVQSYFQMGNSSGNLALEDNITVTGLPYTAANTEASICCAYRYNSNNGIFAVYLNSTSSIFIRCQQVNGSAPRNGGAIALNYTYQTT
Physico‐chemical
properties
protein length:323 AA
molecular weight: 33627,01160 Da
isoelectric point:4,77859
aromaticity:0,08359
hydropathy:-0,34675

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71336.1
1 323
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0069
Central domain 11 206 197 0,1632
C-terminal 207 323 116 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-206
C-terminal
207-323

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC120P
[NCBI] 		2283021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71336.1 [NCBI]
Genbank nucleotide accession
MH598807.1 [NCBI]
CDS location
range 34307 -> 35278
strand +
CDS
ATGCGTATCGACAGTTCAGGTTCGGTGGGTATCGGAAATACTGTACCAGGAGATTTTAATTCTCAAGCTAGAAATTTAGTAATTGGTGGTGGTTCTGGGGATACAGGAATGACTATTTATTCTGGCTCTGGTTCAGGCGATACAGGAAATATTTTCTTTGCAGATGGTACTTCTGGTAGTGACCCAGTTAGAGGTGGAATAACTTATAATCATGGCGATAATTCCATGAATTTTAGAACAAATGATGGTGCTAATAGAATATATATTTCATCATCAGGTAATGTTGGTATTGCTGAAGCTAGTCCACAAACAACACTTCATGTAGATGGAACTGGTGCTTTATTTGAAGGCATGAGTATCGACACAAACTTATCAAATGTTACTTCATCTTTTAGTCGTCAAAATACTGGTTTTAATTATAGAACAACTGAAGGATTAAATGTTACAACAAACAGTAATGCTTCTGCATCACTTAATAGAAAATCAGATGGCAGAATTTTAGATTTCTTTAAAAACGATACTAGAAAAGGTTCAATATCAATAGATGATAACGGTATTAGTATTTCTTTAGGTGGCACAGGCACAGCAAACACATTAGACGATTACGAAGAAGGAACTTGGACACCAGCAGTTAATGGTGCAAGTGGATTTAGCACAGGAATAACTTCTAGTTCAAATTCTAAATATGTAAAAATTGGTAACATAGTTACTGTTCAAAGTTATTTTCAAATGGGAAATTCTTCAGGAAATTTAGCTCTTGAAGATAATATTACAGTAACAGGATTACCTTATACAGCAGCTAATACAGAGGCAAGTATTTGCTGTGCTTATAGATATAATTCTAATAATGGAATTTTTGCAGTTTATTTAAACTCTACAAGTTCAATTTTTATAAGATGTCAACAAGTTAATGGTTCTGCTCCAAGAAATGGTGGAGCAATAGCTCTTAATTATACATATCAAACAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a66f51ea5f438a20cad27d082577429470f822eb14a9d5d5b665452a0243049
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7030
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50