Protein

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Genbank accession
XRQ87595.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MTTQIVIKEITPLAENTTVTVAEGLNLVQRFNNLVDTPSNYIGQAGKYPRVNQTEDAMEFDDADAETFKGKPQSHYLFGDNERGTQRWETGVDNITKSGPWYVTTNLTGLPLNVDGYVLHEQRDDTDDYAKQTYTPNNDNRTFTRIKVGGVYGDWEETQTEIWREYARGQAELEEMRRRNDDQFAASEFVHYGKHFISSGDWSNVNEGLYMVSSSPNIAFMGRPRTSAGVGGTSKTDFPVTHIAGFISQIYNVNAISSSEAVVIKFPEAPNGNIIHDITGDARGTGNKNLNLRTEVDPKYGNIANTDNEAVARVFEHAVSNGDFRDGSTKWDTNDNFAVLNGVMVIGGSGSSRESGNGIVNGQGISNGDEVEISITLQNVSSGAVGLYCSGTTMIDVATGTDYQGNGTWMARGTVTDASALRVRIRNISPTTVAEVVNVSLRKVTEEAVINRIDMFGGEFYLEEVSQANPFVYLGGMPQNQATTMNGIATTPSNRPVSYYAVYDGDTTSKGRGVDFWAATDQQKIDMLSDESNNLFVLDDGRLVQWRMRQRTIAGAGNGDFEGLNPVSDTYLNLSFTDNIVGFIAAQGIKDEGTEYFNSSDPAAALWYGYNHPSNIVDTLGVYRAGRDSAMSTNVGVNGECYFLVFGTVSRLNKGAFHPHINSLGTKLWNRTDGAGGAEWYSSLITKPTTVKHAFIQTTSANVIGARTPTGSIGQNSGHPDGRFYDSISAGGQGGVNDNRLSAWDMGSKEEAAKIFHNVVGGTYRGEELLTHTYLPEQTATTFAGAGDALTLVLSVKADAQVGDRIFVYHNSYGWVEGMVHSIASNRQSLVWSKKYPDGNIHRTQGDGFVVFESSLNYSISGEFMMQDVVGSPTNILLTTDLRNGWVGRWLPTIPPTDTSTQQYQLTRKTLDSGSKQYQRTLDGGTTWSTVSNTIVNETNSITTANFNNGVGIISYTAFAKQTKHSTNAPVLNVSEGLGYVWASADSFAVQGNIFLESLIGKVGKDNQDGNQERRMSLISTFFEPNGSIKSSGDTTRHNPISLAAPLNDSAAVKALWSQCSNNQQVSLKFNYKEMFYDSTPTNTGNEWGDTIGASVYQNAYSVVPIFDGQGTQTDMNGNIVLIGIAELVKPYGYTRNQARAGEQTTGVDL
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 125228,47050 Da
isoelectric point:4,96315
aromaticity:0,09478
hydropathy:-0,43148

Domains

Domains [InterPro]
DC_1387
STR
7–1150
DC_1387
cd19958
STR
93–157
cd19958
XRQ87595.1
1 1150
Architecture
STR
STR 7-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRQ87595.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 421 421 0,4565
Central domain 422 626 206 0,6289
C-terminal 627 1150 523 0,6640
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-421
Central
422-626
C-terminal
627-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage V6Aob
[NCBI] 		3415737 Viruses > unclassified bacterial viruses >
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRQ87595.1 [NCBI]
Genbank nucleotide accession
PV454620 [NCBI]
CDS location
range 29802 -> 33254
strand +
CDS
ATGACCACACAAATAGTGATTAAAGAAATTACCCCACTCGCAGAGAATACAACAGTAACCGTGGCTGAGGGGCTAAATCTAGTACAACGCTTCAATAATCTAGTCGATACACCATCCAATTATATAGGTCAAGCAGGGAAATATCCAAGAGTTAACCAAACCGAAGATGCGATGGAGTTTGATGATGCCGATGCGGAAACCTTCAAAGGTAAACCGCAATCGCATTACTTGTTCGGAGATAATGAACGTGGTACGCAGCGTTGGGAAACTGGAGTTGATAACATTACCAAGTCTGGTCCTTGGTATGTAACCACAAACCTAACCGGGTTGCCACTAAATGTTGATGGATATGTATTGCATGAGCAACGCGATGATACAGACGATTATGCCAAACAGACGTATACACCAAATAACGATAACCGCACATTCACTCGGATTAAAGTGGGTGGGGTGTACGGTGATTGGGAAGAAACTCAGACAGAAATATGGCGGGAGTATGCCAGAGGGCAAGCAGAACTTGAAGAGATGCGTCGTCGTAATGATGACCAGTTCGCGGCTAGCGAGTTCGTACATTACGGAAAGCATTTTATATCTTCTGGTGATTGGTCTAATGTGAATGAAGGACTGTACATGGTCTCCTCATCACCAAACATTGCATTTATGGGTAGACCGAGAACGTCCGCTGGCGTGGGGGGGACAAGTAAGACTGATTTTCCTGTAACGCATATCGCTGGTTTTATATCCCAAATTTATAACGTTAATGCCATCAGCAGCAGCGAAGCAGTTGTCATAAAATTCCCAGAAGCACCAAACGGCAATATTATTCATGACATCACTGGTGATGCTCGCGGCACAGGTAACAAGAACCTAAACCTACGCACAGAAGTCGATCCAAAATACGGCAATATAGCAAACACAGATAATGAGGCGGTAGCCCGTGTTTTTGAGCATGCTGTGTCCAATGGAGACTTTAGAGATGGCTCAACGAAATGGGATACTAACGATAACTTTGCCGTTTTGAATGGAGTTATGGTTATAGGAGGTTCGGGATCGTCTCGGGAATCAGGAAACGGTATTGTTAATGGGCAGGGGATATCGAATGGCGATGAAGTCGAAATATCTATCACCCTCCAAAATGTATCAAGCGGCGCAGTTGGATTATATTGTAGCGGTACTACAATGATTGATGTTGCAACGGGAACAGACTACCAAGGAAATGGTACTTGGATGGCGAGAGGTACGGTAACAGACGCTTCGGCGTTGCGGGTTCGAATTAGAAACATATCGCCAACAACAGTAGCTGAAGTGGTTAATGTTTCGTTGCGTAAAGTGACAGAAGAAGCAGTAATAAACCGTATAGACATGTTCGGTGGAGAGTTCTATCTCGAAGAAGTGAGCCAAGCAAATCCGTTTGTTTATCTAGGAGGAATGCCACAAAACCAAGCTACAACAATGAACGGCATTGCAACAACACCCTCAAACCGACCTGTAAGTTACTACGCGGTTTATGATGGAGATACAACCTCAAAAGGTCGAGGTGTTGACTTCTGGGCTGCCACAGACCAACAGAAAATCGACATGCTGAGTGATGAGTCTAATAACTTATTCGTGCTTGATGATGGTCGTCTGGTGCAATGGCGCATGCGTCAGCGTACTATTGCAGGTGCCGGAAATGGCGACTTCGAAGGATTAAACCCGGTCAGTGACACTTACCTAAATTTATCCTTTACTGATAACATTGTTGGTTTTATTGCAGCACAAGGCATAAAGGATGAGGGAACTGAATATTTTAATTCTAGCGATCCAGCAGCAGCACTATGGTATGGATATAACCATCCATCAAATATTGTCGATACATTAGGTGTATACCGAGCTGGTCGAGATAGTGCTATGAGCACTAATGTTGGTGTAAATGGCGAGTGTTATTTTTTAGTTTTTGGTACTGTATCGAGATTGAATAAAGGCGCTTTCCACCCGCACATCAATTCACTGGGAACAAAGCTTTGGAACCGCACAGACGGCGCAGGCGGCGCGGAGTGGTATTCGAGTTTGATTACGAAACCGACCACAGTAAAACATGCGTTCATCCAAACAACTAGTGCTAATGTCATAGGAGCTCGCACTCCAACGGGTAGTATAGGTCAAAACTCTGGACACCCGGACGGTCGGTTTTATGATTCTATATCTGCCGGGGGACAGGGTGGAGTGAACGATAACCGCCTATCTGCTTGGGATATGGGGAGCAAAGAAGAAGCTGCAAAAATATTTCATAATGTGGTGGGTGGCACCTACCGAGGAGAGGAACTATTAACGCACACATACCTACCAGAACAGACAGCTACCACATTTGCAGGTGCTGGGGATGCACTAACTTTAGTACTCTCAGTAAAAGCAGACGCACAGGTCGGCGACCGTATATTCGTTTACCATAATTCCTACGGATGGGTTGAAGGTATGGTACACTCGATAGCATCTAACCGTCAATCGCTGGTGTGGTCTAAGAAATACCCTGACGGTAATATCCACAGAACCCAAGGTGACGGATTTGTAGTTTTTGAGAGTAGTCTGAACTACTCCATATCAGGTGAGTTTATGATGCAAGATGTAGTTGGAAGTCCTACCAATATTTTGCTAACCACTGACTTGCGTAATGGTTGGGTCGGGCGGTGGCTCCCAACAATTCCTCCCACAGACACATCAACCCAACAATATCAGCTTACACGAAAAACTTTAGATTCGGGAAGCAAGCAATATCAACGAACCCTAGATGGCGGCACGACTTGGTCAACAGTAAGTAATACAATTGTAAACGAAACGAACTCAATAACCACCGCTAACTTCAACAACGGCGTTGGAATTATTTCTTACACCGCATTTGCCAAACAAACCAAACACAGCACGAATGCGCCTGTTCTTAATGTTTCTGAAGGTCTGGGATATGTATGGGCAAGTGCAGATAGTTTTGCGGTGCAGGGAAATATTTTCTTAGAATCGCTTATAGGAAAGGTTGGTAAAGACAACCAAGACGGAAATCAGGAACGAAGAATGTCACTAATAAGCACATTTTTCGAGCCGAACGGATCTATAAAATCATCAGGGGATACAACTCGCCATAACCCAATATCGCTCGCAGCCCCATTAAATGACAGTGCAGCAGTCAAGGCTCTGTGGAGCCAATGTAGCAACAACCAGCAGGTATCTTTAAAATTCAATTATAAAGAAATGTTTTACGATTCAACACCAACCAATACAGGCAATGAGTGGGGAGATACTATCGGTGCGTCAGTTTATCAAAACGCATATAGTGTAGTACCTATCTTTGACGGTCAGGGTACACAAACAGATATGAACGGTAACATTGTGCTAATAGGAATAGCCGAACTTGTAAAACCATATGGTTACACCCGCAACCAAGCACGAGCTGGTGAACAAACCACAGGTGTAGATCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
240b11590148568e74bf88feb8a0608379112ac026c84e5bbaa39e745dc855d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3461
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50