Protein

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Genbank accession
UVD32287.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTSIKKESRKGGFKAFGSGGGGKSGGSARTPVESPDSLHNISYATILDVISNGEVFGPAHPDDPLKDIYLDGTPIQNDDGSLNFERVETDYRVGTIDQEHIAGFPASSSITQVDVEVKQSTPWTQQIFGSELSALRVSIFTPTLLKTFDSGDNAGDRVGTKVDYEIDLATDGGSFVTVISSSFDGKTVNGYTRTHRIELPDANNWTVRVRRLTPDSSSTTLQNSIYVSNYAEVIDGKFRHPMTAMVGLKIDAEQFQSIPTRAYHWKGRIIRVPSNYDPETREYLGVWDGTFKSAYSNNPAWVFYDILTNNLYGLGEYVKAPSVDRYALYQIGAYCDQMVDDGSGGLEPRFVANCYIQSANDALRVLNDLSSIFRGMAYWANNQVVPVADMPSDPVFQYTNSNVIDGKFEYSGTDLRTRKTVALVSWNDPSNFYKSKVEVVEDDDGIARYGIRKTEVVAFGCTSRGQAQRVGLYLLYTSRMETGGVSFSVGLDGEIPQPGSIIKIADQNRAGRQIGGRISKSGDDYIVTDRDHHAKVGDKLNVNTVNGSIDSKTITAIDGRKITVSPNFDSKPSTQLVWSIDADDLVTLQARVISVSDSDGITYDVSTVIHEPRKFEAIDTGVRLDPLPVSVVPPRTQTAPTNIKIEQFNSFKQGTTRQGAEISWDAPEYAVQYDVQWKRDNGDWVSVPRTGTRTVTLPDIYSGEYLVRVKAINSLNVPSLWGYSDATQLDGIIDPPPVLSFLNTVSEVMAIKLEWGYPSTANIISQVEIRASQTNDFASSYPLTYVAYPSTSFTVNGLGYGTELFFWARLLDKNGQAGEWKPLSTEAGVYGKSSESASEIISYLQDQITESELAQSLVDEITEGTEAKVAVDILEQDLKANWQVKTEVRSDGKVVQAGVGLGASIGEDGTTRSEFLVHADLVGFLNSTDGVIHAPFIFDTVNDTAILNSAIIGEATIDFAKISDTLQSTNWNWNGGDFTGWKIEKGGNAYFGGDVIFKGTLDGADGNFSGTVQANNIVGDIVSGIIKTNPSSYTGFTGSNAWATVANLVAIDSARPYPRTLSLRVSGDANDFTIIILSDESFPSTAARFRLINTANNNVVWEYSYTFDATGAGTTTTARIPFIDGIVPANDPAGTYALQVSSDRDIAWIRYMYNDSLNAINSDTIGYLFKNSGELS
Physico‐chemical
properties
protein length:1176 AA
molecular weight: 128272,75930 Da
isoelectric point:4,69811
aromaticity:0,09864
hydropathy:-0,27959

Domains

Domains [InterPro]
DC_0014
STR
2–1167
DC_0014
IPR053171
Unmapped
20–863
IPR053171 IPR015406
IPR055385
ATT
109–235
IPR055385 IPR032876 IPR013783 IPR036116
IPR036116
STR
639–716
IPR036116
IPR003961
STR
639–714
IPR003961
UVD32287.1
1 1176
Architecture
STR
ATT
STR
ATT
STR
STR 2-108 | ATT 109-235 | STR 236-358 | ATT 359-518 | STR 519-1167 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVD32287.1
1 1176
Domain Start End Length (AA) Confidence
N-terminal 1 555 555 0,8575
Central domain 556 970 416 0,0413
C-terminal 971 1176 205 0,6990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-555
Central
556-970
C-terminal
971-1176

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VaM_H2
[NCBI] 		2973487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD32287.1 [NCBI]
Genbank nucleotide accession
OP125534.1 [NCBI]
CDS location
range 1 -> 3531
strand +
CDS
ATGACTAGCATTAAAAAAGAGTCAAGAAAAGGCGGTTTTAAAGCATTCGGCTCTGGCGGCGGTGGCAAGAGCGGCGGAAGCGCTAGAACTCCGGTAGAGTCACCGGATAGCCTTCACAACATATCCTACGCAACCATTCTAGACGTTATCAGTAATGGTGAAGTTTTCGGTCCAGCGCATCCAGACGATCCACTAAAGGATATCTACCTTGATGGTACTCCAATTCAAAACGATGACGGCTCACTCAACTTTGAGCGAGTGGAAACGGATTACCGTGTCGGCACAATAGACCAAGAACATATAGCTGGCTTTCCTGCCTCATCTAGCATTACTCAAGTTGATGTTGAGGTTAAGCAGTCAACGCCGTGGACTCAGCAAATATTCGGCTCTGAATTATCAGCCTTGCGCGTTAGCATCTTCACGCCTACCTTGCTCAAAACTTTCGATTCTGGCGACAACGCAGGGGATCGCGTTGGCACAAAAGTAGATTATGAAATTGACTTAGCCACTGACGGCGGTTCATTTGTTACCGTTATTAGTTCATCATTCGATGGCAAGACAGTTAACGGATACACAAGAACGCACAGAATTGAACTACCAGATGCTAATAACTGGACTGTTAGAGTTAGGCGTTTAACTCCTGATTCGTCGTCTACAACACTGCAAAACAGTATCTATGTATCAAACTATGCCGAGGTTATAGATGGCAAATTCCGCCATCCTATGACTGCAATGGTTGGTTTAAAGATTGATGCTGAGCAATTCCAAAGCATCCCGACTCGGGCCTATCACTGGAAAGGCCGCATCATTCGCGTACCTTCAAACTACGATCCAGAAACTAGAGAGTATCTAGGCGTTTGGGATGGGACATTTAAAAGCGCATACAGCAACAACCCTGCTTGGGTTTTCTACGACATTCTAACCAATAACCTTTACGGATTGGGTGAATATGTAAAGGCTCCATCAGTTGACCGTTATGCGCTGTATCAAATCGGTGCTTATTGTGACCAAATGGTCGATGACGGAAGCGGCGGATTAGAGCCTAGATTTGTAGCCAACTGCTATATCCAATCGGCTAACGATGCACTTAGAGTTCTCAATGACCTATCAAGCATATTTCGAGGTATGGCATATTGGGCCAATAATCAAGTTGTTCCTGTTGCGGACATGCCATCCGATCCGGTTTTCCAGTACACAAACTCAAACGTTATTGATGGTAAATTTGAATACTCTGGAACCGACCTTAGAACACGCAAAACCGTTGCTTTGGTATCTTGGAATGATCCATCAAATTTCTACAAATCAAAGGTTGAAGTTGTTGAAGATGACGACGGCATAGCGCGATACGGAATTAGAAAGACTGAGGTTGTCGCATTCGGTTGCACTTCTCGCGGTCAGGCTCAGCGTGTTGGTCTGTACCTGCTTTACACGTCAAGAATGGAAACGGGCGGCGTGTCGTTTAGTGTTGGCCTTGATGGTGAAATACCACAACCTGGTTCAATCATTAAGATTGCAGACCAAAACCGAGCTGGTCGTCAAATTGGTGGTCGGATCTCAAAATCAGGCGATGACTACATAGTCACAGATAGAGATCACCATGCCAAGGTCGGAGATAAGCTTAACGTAAACACGGTTAACGGCTCGATTGACTCAAAAACCATCACGGCAATTGACGGAAGAAAGATAACAGTATCGCCTAACTTTGACAGCAAGCCTTCAACTCAGTTGGTTTGGTCTATCGACGCTGACGACCTTGTTACGCTTCAAGCTCGCGTAATTTCAGTTTCGGATAGTGATGGTATTACCTATGACGTATCCACGGTAATTCACGAACCTAGAAAATTTGAAGCAATAGACACTGGTGTTAGACTCGATCCACTTCCTGTTTCTGTTGTGCCGCCTAGAACACAAACTGCACCGACCAACATCAAGATTGAGCAATTCAACTCATTCAAGCAAGGCACTACTAGGCAGGGAGCAGAAATATCATGGGATGCGCCAGAATACGCAGTTCAATATGATGTGCAATGGAAGCGAGATAATGGCGATTGGGTATCAGTACCACGCACCGGTACGCGAACAGTAACATTGCCAGATATTTACTCTGGTGAATACCTAGTCCGCGTTAAAGCTATCAACTCGCTAAACGTGCCATCATTGTGGGGATACTCTGACGCCACTCAACTAGACGGAATTATCGATCCACCGCCTGTATTGTCATTTCTAAACACAGTATCAGAAGTAATGGCAATCAAGCTTGAGTGGGGGTATCCATCAACAGCGAACATTATTAGCCAAGTTGAAATCAGAGCAAGCCAAACCAATGACTTTGCATCTAGTTATCCACTAACTTACGTCGCATACCCATCAACCTCATTTACGGTTAACGGGCTAGGTTATGGTACGGAGCTATTCTTTTGGGCCCGACTGCTAGATAAAAACGGACAGGCTGGAGAATGGAAGCCGTTATCCACAGAAGCGGGTGTTTACGGGAAGTCATCAGAAAGCGCAAGTGAAATAATTAGCTACCTTCAAGATCAAATCACTGAAAGCGAACTAGCACAAAGCCTTGTTGATGAAATAACCGAAGGAACAGAGGCCAAGGTTGCTGTCGATATCCTTGAGCAAGACCTAAAAGCAAACTGGCAGGTTAAAACAGAAGTTAGGTCAGACGGTAAAGTTGTTCAAGCTGGTGTAGGTCTCGGGGCGTCAATAGGTGAGGATGGCACAACTAGATCTGAATTCTTGGTTCATGCTGATTTAGTCGGGTTTTTAAATTCAACCGACGGTGTTATACACGCACCATTTATCTTTGACACCGTAAACGACACAGCAATACTTAACTCGGCCATCATAGGTGAGGCAACAATTGACTTCGCCAAGATCAGCGACACGCTACAGTCCACAAACTGGAACTGGAACGGCGGAGACTTTACCGGATGGAAAATAGAGAAAGGTGGAAATGCTTACTTTGGCGGCGATGTAATATTTAAAGGGACGCTTGATGGTGCAGACGGAAACTTTAGCGGCACCGTTCAAGCTAATAATATCGTTGGTGATATTGTATCGGGAATAATAAAAACAAACCCATCTAGTTATACTGGATTTACTGGATCGAACGCGTGGGCTACGGTTGCAAACTTGGTTGCCATTGATAGCGCAAGGCCATACCCAAGAACATTAAGCTTGAGGGTTTCCGGTGATGCAAATGATTTTACTATCATTATACTTTCAGATGAGAGCTTTCCGTCTACAGCGGCTAGGTTTAGGTTAATAAACACAGCAAACAACAACGTAGTTTGGGAATACAGCTACACATTCGATGCGACAGGTGCAGGAACAACAACAACAGCTAGAATCCCATTCATTGATGGGATTGTGCCAGCAAACGACCCAGCAGGAACATACGCGCTTCAAGTTTCATCTGACAGGGATATTGCGTGGATAAGGTATATGTATAACGACTCACTAAACGCCATTAATTCAGATACAATAGGCTATCTATTCAAGAACTCTGGCGAGTTATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
79c9fc18be17ec09463031a4234ee9556b25afa673b587272ad2800669cc1591
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2850
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50