Protein

UniProt accession
P10930 [UniProt]
Protein name
Short tail fiber protein gp12
RBP type
TF

evidence: RBPdetect

probability: 0,5573

Protein sequence
MSNNTYQHVSNESRYVKFDPTDTNFPPEITDVQAAIAAISPAGVNGVPDASSTTKGILFIPTEQEVIDGTNNTKAVTPATLATRLSYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESSNGVIKISSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSETTATESDQGVVQLATVAQVRQGTLREGYAISPYTFMNSSSTEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIQQRGGQIIYGTLRIEDTFTIANGGANITGTVRMTGGYIQGNRIVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGNPSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQIQQMSYHKHAGGFGEHDDLGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 56204,57380 Da
isoelectric point:5,81130
aromaticity:0,07021
hydropathy:-0,39943

Domains

Domains [InterPro]
IPR015173
246–326
IPR015173 IPR037053 IPR044916
IPR011083
344–400
IPR011083 IPR027448
P10930
1 527
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage T4
[NCBI] 		10665 Uroviricota > Caudoviricetes > Straboviridae > Tequatrovirus >
Host Escherichia coli
[NCBI] 		562 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAA32495.1 [NCBI]
Genbank nucleotide accession
M26253 [NCBI]
CDS location
range 863 -> 1034
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGTTATGTAAAATTTGATCCTACCGATACGAATTTTCCACCGGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGAGTAAATGGAGTTCCTGATGCATCGTCAACAACAAAGGGAATTC
Genbank protein accession
CAA29951.1 [NCBI]
Genbank nucleotide accession
X06792 [NCBI]
CDS location
range 27 -> 1610
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGTTATGTAAAATTTGATCCTACCGATACGAATTTTCCACCGGAGATTACTGATGTTCACGCTGCTATAGCAGCCATTTCTCCTGCTGGAGTAAATGGAGTTCCTGATGCATCGTCAACAACAAAGGGAATTCTATTTATTCCCACTGAACAGGAAGTTATAGATGGAACTAATAATACCAAAGCAGTTACACCAGCAACGTTGGCAACAAGATTATCTTATCCAAATGCAACTGAAACTGTTTACGGATTAACAAGATATTCAACCAATGATGAAGCCATTGCCGGAGTTAATAATGAATCTTCTATAACTCCAGCTAAATTTACTGTCGCCCTTAATAATGCGTTTGAAACGCGAGTTTCAACTGAATCCTCAAATGGTGTTATTAAAATTTCATCTCTACCGCAAGCATTAGCTGGTGCAGATGATACTACTGCAATGACTCCATTAAAAACACAGCAGTTAGCTATTAAATTAATTGCGCAAATTGCTCCTTCTGAAACCACAGCTACCGAATCGGACCAAGGTGTTGTTCAATTAGCAACAGTAGCGCAGGTTCGTCAGGGAACTTTAAGAGAAGGCTATGCAATTTCTCCTTATACGTTTATGAATTCATCTTCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACACAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCGGTTACTGGCGCAACTCTTAATGGTCGTGGTTCTACGACGTCAATGAGAGGCGTAGTTAAATTAACTACAACCGCCGGTTCACAGAGTGGAGGCGATGCTTCATCAGCCTTAGCTTGGAATGCTGACGTTATCCAGCAAAGAGGTGGTCAAATTATCTATGGAACACTCCGCATTGAAGACACATTTACAATAGCTAATGGTGGAGCAAATATTACGGGTACCGTCAGAATGACTGGCGGTTATATTCAAGGTAACCGCATCGTAACACAAAATGAAATTGATAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCCGCTGATAGTCTTCCTAGTGATGCTTGGCGCTTCTGCCATGGTGGAACTGTTTCAGCGTCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATATGGCGGAAACCCATCAAATCCTGGATTGCCTGACATGCGTGGTCTTTTTGTTCGTGGTTCTGGTCGTGGTTCTCACTTAACAAATCCAAATGTTAATGGTAATGACCAATTTGGTAAACCTAGATTAGGTGTAGGTTGTACCGGTGGATATGTTGGTGAAGTACAGATACAACAGATGTCTTATCATAAACATGCTGGTGGATTTGGTGAGCATGATGATCTGGGGGCATTCGGTAATACCCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAATGACGGATATGAAATTGACCCAGAATCACAACGAAATTCCAAATATACATTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA
Genbank protein accession
CAA32398.1 [NCBI]
Genbank nucleotide accession
X14192 [NCBI]
CDS location
range 3384 -> 3396
strand +
CDS
ATGAGTAATAATA

Gene Ontology

Description Category Evidence (source)
GO:0098025 virus tail, baseplate Cellular Component IDA:UniProtKB (UniProt)
GO:0098024 virus tail, fiber Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0046872 metal ion binding Molecular Function IEA:InterPro (UniProt)
GO:0098670 entry receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID: 1OCY

Method: PDB

Resolution: 1,0000

Evidence: 1,0000

View on RCSB

Literature

Title Authors Date PMID Source
Structure of the T4 baseplate and its function in triggering sheath contraction. Taylor NM, Prokhorov NS, Guerrero-Ferreira RC, Shneider MM, Browning C, Goldie KN, Stahlberg H, Leiman PG 2016-05-19 27193680 PubMed
Nucleotide sequences of bacteriophage T4 genes 9, 10 and 11. Prilipov AG, Selivanov NA, Efimov VP, Marusich EI, Mesyanzhinov VV 1989-04-25 2726468 PubMed
Nucleotide and deduced amino acid sequence of bacteriophage T4 gene 12. Selivanov NA, Prilipov AG, Mesyanzhinov VV 1988-03-25 3357780 PubMed
Crystal structure of a heat and protease-stable part of the bacteriophage T4 short tail fibre. van Raaij MJ, Schoehn G, Burda MR, Miller S 2001-12-14 11743729 PubMed
Using transposon Tn5 insertions to sequence bacteriophage T4 gene 11. Barrett BK, Berget PB 1989-05 2548819 PubMed
Crystal structure of a heat and protease-stable part of the bacteriophage T4 short tail fibre Mark J van Raaij, Guy Schoehn, Martin R Burda, Stefan Miller 2001-12 10.1006/jmbi.2000.5204 DOI
Nucleotide and deduced amino acid sequence of bacteriophage T4 gene 12 Nikolay A. Selivanov, Alexey G Prilipov, Vadim V. Mesyanzhinov 1988 10.1093/nar/16.5.2334 DOI
Nucleotide sequences of bacteriophage T4 genes 9, 10 and 11 Alexey G. Prilipov, Nikolay A. Selivanov, Vladimir P. Efimov, Elena I. Marusich, Vadim V. Mesyanzhinov 1989 10.1093/nar/17.8.3303 DOI
Structure of the T4 baseplate and its function in triggering sheath contraction Nicholas M. I. Taylor, Nikolai S. Prokhorov, Ricardo C. Guerrero-Ferreira, Mikhail M. Shneider, Christopher Browning, Kenneth N. Goldie, Henning Stahlberg, Petr G. Leiman 2016-05 10.1038/nature17971 DOI
Using Transposon Tn5 Insertions to Sequence Bacteriophage T4 Gene<i>11</i> BENJAMIN K. BARRETT, PETER B. BERGET 1989-05 10.1089/dna.1.1989.8.287 DOI