Protein

View in Explore
Genbank accession
XCO41030.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MMDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRATDLNVSQLQSAHIAEEARDSALLAMPQDDAGNLDARNRRIVRLAPGVEGTDAINKNQLDTTLGEAGGILSEIKQTEKDIQDYIENFADDTTSLKGINWVYNNGSANGGETSILITREGPVFAVPTIYINGDRQSVGYHYSYDSGDKTIHLVKPLEAGDFVECVTSEGVLPLSNLLSTPGGASQIGTKSGLTVQDYLNGVKSATILRNIEPVIDGQRIVLSEISPTLGPKSGGTLVYDQSDTSSVDDGYTVFVTAGGKRWKREESYIDVAWFGQNFGLALQTAVNLVDNYVRTVGFYSRKTIYIAAGNYTTDRQIDIPSYVSVVAIGNVNINGASLPVNSYVLRITNKVTGISTTQHSGWNLGSVGGTLRLVGNGSSNQVDGLFVGNTTEMSDVRNVSLYAVATSGVRYGLTFGSTNTYLFTATKCHFETSLVNLYCPYTTSANSGEKMVFNDTVFGGATRNHVEMSTPGMDLTFNNCSFDFTGGSIIYGTETWGYSKVGLNSCHFEGFDNLWVKVDAPQGGFIGSNRAITIANATVLPRRRSNTTGTNSPSRMHIDAKSTPVYISGLDLRHEVVPYTEEIFMASPETTLMLQGYLKDPYYQIPNKSYIQNRGWDITDETTGTLVNSSDTMDALTRFTCTERNALSAEVVDGGTSGKLLAMTGAGGYFTLVTKGFIPVSTHQRIGGAMSVQAAASTGNIHCTIGVQWFDYDGNLIGTNQSFTINMREVFNNPSLPNFAEGNNRFISTPTRAFRAPAGAAKCKPLWRISGHTGVVNISRLASFVL
Physico‐chemical
properties
protein length:876 AA
molecular weight: 95311,54650 Da
isoelectric point:5,54830
aromaticity:0,09132
hydropathy:-0,20091

Domains

Domains [InterPro]
DC_1263
ATT
1–240
DC_1263 DC_1149
IPR005604
ATT
2–128
IPR005604 DC_0983
XCO41030.1
1 876
Architecture
ATT
STR
ATT 1-240 | STR 241-876
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41030.1
1 876
Domain Start End Length (AA) Confidence
N-terminal 1 368 368 0,9983
Central domain 369 710 343 0,9922
C-terminal 711 876 165 0,9670
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-368
Central
369-710
C-terminal
711-876

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146048
[NCBI] 		3232227 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41030.1 [NCBI]
Genbank nucleotide accession
PP889497.1 [NCBI]
CDS location
range 34679 -> 37309
strand +
CDS
ATGATGGACCAAGAAATTAAAACAGTCATCCAGTACCCCACAGGGTCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTAGCTGACGACAACCGCAGACTCCTGAGTAACATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAGCTCCTTGTGGAAACTACAGGGTTCGACCGTGTGGAAATCCGCAGATTCACCTCAGCGTCTGAGCGTATTGTTGACTTCAGCGATGGCTCGGTTCTCCGCGCAACCGACCTTAACGTCTCTCAGCTTCAGTCTGCCCATATCGCAGAGGAAGCCCGTGACTCGGCACTACTGGCTATGCCGCAGGATGATGCTGGCAACCTTGATGCACGTAACCGCAGAATCGTTCGGCTGGCTCCGGGTGTTGAAGGTACGGACGCAATCAACAAGAACCAGCTGGACACTACCTTGGGTGAGGCTGGTGGCATCCTGTCGGAAATCAAACAGACCGAGAAGGACATTCAGGATTACATCGAGAACTTTGCAGATGACACCACGTCTCTCAAGGGAATCAACTGGGTGTATAACAATGGGTCGGCCAATGGTGGAGAGACCTCCATTCTGATTACCCGCGAAGGGCCAGTGTTCGCTGTGCCTACCATTTACATCAACGGGGACAGACAGTCTGTTGGTTACCACTACTCTTACGACTCCGGCGATAAGACCATTCATCTAGTTAAGCCGCTTGAGGCTGGCGACTTTGTGGAATGTGTTACCTCTGAGGGTGTACTGCCGCTGTCTAACCTCCTGTCGACACCGGGTGGAGCCAGCCAGATTGGCACTAAGAGTGGCCTGACTGTGCAGGACTACCTGAACGGGGTTAAGTCAGCAACTATTCTGCGAAACATTGAGCCAGTCATTGATGGACAGCGAATCGTACTCTCTGAGATTAGCCCTACTCTGGGTCCTAAGTCTGGAGGTACCTTGGTGTACGACCAGTCTGACACATCCTCTGTGGACGACGGGTATACTGTTTTCGTGACGGCTGGCGGTAAACGGTGGAAGCGGGAAGAGTCCTACATTGACGTAGCGTGGTTCGGTCAGAACTTTGGTCTTGCCCTACAGACCGCTGTTAACCTCGTTGACAACTACGTGAGAACTGTCGGTTTCTACAGCCGTAAGACCATCTACATTGCAGCTGGTAACTACACCACTGACAGGCAGATTGACATACCGTCATATGTCTCCGTGGTTGCAATTGGTAACGTGAATATCAACGGAGCATCTCTTCCGGTTAACTCCTACGTACTCCGAATCACCAACAAGGTAACTGGAATCTCCACGACCCAGCACTCTGGTTGGAACTTAGGTTCGGTAGGCGGTACTCTCCGTCTGGTGGGTAACGGAAGCTCCAACCAAGTTGACGGGCTGTTTGTCGGCAACACTACGGAAATGAGCGATGTACGTAACGTCAGCCTTTACGCTGTGGCAACCTCAGGTGTACGCTACGGGTTAACATTCGGTAGCACCAATACGTACCTATTCACAGCGACCAAGTGTCACTTCGAGACCTCTCTGGTGAACCTGTACTGCCCGTACACCACTAGCGCCAACTCTGGTGAGAAGATGGTGTTCAATGATACTGTATTCGGCGGGGCAACTCGTAACCACGTTGAGATGAGCACTCCGGGGATGGACCTAACGTTCAATAACTGCTCGTTCGACTTTACCGGCGGTAGTATCATCTACGGGACGGAGACTTGGGGTTACTCTAAGGTTGGTCTTAACAGCTGCCACTTCGAAGGTTTTGACAACCTGTGGGTTAAGGTGGATGCACCTCAAGGTGGCTTCATTGGGTCAAACAGGGCAATCACTATCGCAAACGCTACGGTACTTCCGCGTCGACGCTCGAATACGACTGGCACCAACTCGCCTAGCCGAATGCATATTGATGCTAAGTCTACCCCTGTGTATATCAGCGGTCTGGACCTGCGCCATGAGGTTGTCCCGTATACCGAGGAAATCTTCATGGCTTCCCCAGAGACCACGTTGATGCTTCAAGGCTACCTGAAAGACCCGTACTACCAGATTCCTAACAAGTCATACATCCAGAACCGTGGGTGGGACATCACAGATGAAACCACTGGGACGTTGGTGAACAGCTCAGACACAATGGATGCACTGACCCGCTTTACGTGCACCGAGCGAAATGCTCTTTCGGCTGAGGTTGTGGACGGAGGGACTTCCGGTAAGTTACTGGCAATGACTGGCGCTGGTGGGTACTTCACACTAGTCACCAAAGGCTTCATTCCGGTGAGTACCCACCAGCGAATTGGTGGAGCAATGTCGGTTCAGGCGGCAGCAAGTACCGGAAACATCCATTGCACGATTGGTGTCCAGTGGTTCGACTACGATGGCAACCTAATCGGAACCAACCAATCCTTTACGATAAACATGCGAGAAGTGTTCAACAACCCTTCGCTGCCTAACTTCGCAGAGGGGAACAACCGCTTCATTTCCACGCCAACAAGGGCTTTCCGCGCACCAGCCGGGGCTGCTAAATGCAAACCGCTGTGGCGCATCTCTGGCCATACTGGCGTGGTTAACATCTCACGCTTAGCATCATTTGTGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
922312225106676e8c068a8cd688f354e276e9bc5de7f0164a705e8ca805311c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7518
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank