Protein

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Genbank accession
AUR98597.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSARLIRYTLDGIKLTHDISFGVTDGDGFDVYINRAKLDKGLDYDVSGSVDELRKGDGKITLKAAHAASDVLLILSDTLARRVTNFAKAARFEEAEIDNEFDNLLRLLEDAALNLQSTPYFSPPDIGLVNGELPPLIAGGVLRVNEHKNGFELVELDKVPEFQEALRKATEQADRSESEAGKSEASAQEAQGIADSMGRYRGLWPDTGGSAKKGDTWQTQAGGKPTGKYYTALKDTALAPVGDNQNWRESVTKSSLAGLTDIVFTSSGGKSAIENMIDELKLNPIMYAVGSIMKTGGTTWKYKDSTGQITLSNFRAFNARCLLDFVSGGDAEDNYSPAIQRMLDSLEQYSQDTQNSGAFQEKIELYFPDGDYLMKSPVIKKYRNFMRFTGTGRLKAHAAFSGGDYLMELIACSHIEVDGLQFDGNNYAAKSAMRVSGDGFTGTKRNSTNIHWNDCFFYNFGATGTNGYVVDTLSPNGVAGDYSIDDSGFNNCIFLGSYGGAIRLASSEIKINGGKFSFIGVDGVNPVISLGNGTSLIMSGVVFTTCSSEHLGADDGASIGRVSLTGCYSETTTKPLYSQSGGTCRSLEINGGYFSAPTNSDATFILFSGNCKGQLSMSGASFQRNGYKWIDLGDSGSYIGDVQTSTTSWLSYYPKVKNGTFTERKIAIQTTQDGDAKRLLDVKYDRSNNNKLQLFVGLIDDFTRLRFLTLMDALMYVDQSGYTECEVQVPAGVHNINKSFAFSGGVSIVCAGRDKTTLNITKDINIRGGSFRIQSASLSYTDRVIKNKNGLVELFGCNFTAATNSIFLVEHHSGVTSIISGDFLVGGSGVILDNELISSGVVTYNATNFTNTSAVACASSTALCRVKVVSDSAPANGFWPRGAIQEDSEVNAGGVVQRINVTAGSSGDWKAIITAAI
Physico‐chemical
properties
protein length:917 AA
molecular weight: 98654,09260 Da
isoelectric point:5,22677
aromaticity:0,09269
hydropathy:-0,21745

Domains

Domains [InterPro]
DC_1575
STR
121–705
DC_1575
Coil
Unmapped
159–179
Coil IPR011050 DC_1395
AUR98597.1
1 917
Architecture
STR
RBD
STR 121-705 | RBD 706-917
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98597.1
1 917
Domain Start End Length (AA) Confidence
N-terminal 1 334 334 0,9962
Central domain 335 665 332 0,9776
C-terminal 666 917 251 0,3682
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-334
Central
335-665
C-terminal
666-917

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.254.O._10N.286.45.C8
[NCBI] 		1881356 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98597.1 [NCBI]
Genbank nucleotide accession
MG592620.1 [NCBI]
CDS location
range 15230 -> 17983
strand +
CDS
ATGTCAGCACGATTAATACGATACACATTAGACGGCATTAAGCTAACTCATGATATTAGCTTTGGTGTGACGGATGGTGATGGATTTGATGTTTATATAAACCGAGCAAAGCTAGACAAAGGCTTGGATTACGATGTGAGTGGAAGTGTGGACGAGTTGCGAAAAGGTGACGGAAAAATCACACTGAAAGCAGCGCACGCAGCGTCAGATGTATTGCTGATCTTGTCTGATACATTGGCGCGCCGTGTAACTAACTTTGCGAAAGCTGCGAGATTTGAAGAAGCGGAGATCGACAACGAGTTCGACAACCTATTGCGTTTACTGGAAGATGCAGCGCTAAACCTACAATCAACACCGTACTTTTCACCGCCAGATATAGGTTTGGTGAATGGTGAGCTACCGCCGCTTATTGCTGGTGGTGTATTGCGCGTAAATGAGCACAAAAACGGCTTCGAGCTGGTGGAGCTTGATAAGGTGCCAGAGTTTCAGGAGGCGCTAAGAAAGGCAACAGAGCAAGCGGATAGATCGGAAAGTGAGGCGGGTAAGTCAGAAGCAAGCGCGCAAGAGGCGCAAGGCATTGCGGATTCAATGGGGAGATACAGAGGGTTGTGGCCTGACACTGGCGGCAGTGCGAAAAAGGGAGATACTTGGCAAACGCAAGCTGGAGGAAAGCCGACTGGGAAGTATTACACAGCACTAAAAGATACAGCACTGGCTCCAGTTGGGGACAATCAGAACTGGAGAGAGTCGGTAACAAAGAGCAGCTTGGCAGGGCTTACGGATATTGTGTTTACGTCAAGCGGGGGGAAGTCGGCAATTGAGAACATGATTGACGAATTAAAACTAAACCCAATTATGTATGCGGTCGGCTCGATAATGAAAACGGGCGGTACGACATGGAAATACAAAGATTCAACAGGTCAAATTACACTGAGCAACTTTAGGGCGTTTAATGCTAGGTGCTTACTGGATTTTGTTAGTGGAGGGGATGCGGAAGATAATTATTCTCCAGCAATTCAGAGGATGTTAGATAGTCTAGAGCAATACAGCCAAGACACCCAGAATAGCGGGGCATTCCAAGAGAAGATAGAGCTCTATTTTCCTGATGGTGACTATCTAATGAAATCACCAGTGATCAAAAAATACAGAAACTTTATGCGCTTTACTGGTACTGGTAGGTTGAAAGCGCACGCTGCATTTTCTGGTGGTGATTACCTAATGGAGCTTATTGCATGTTCTCACATTGAGGTTGATGGGCTTCAGTTTGACGGTAACAACTACGCGGCAAAATCAGCAATGCGCGTATCTGGTGATGGGTTTACCGGAACCAAGCGTAATTCAACAAATATACATTGGAACGATTGTTTCTTTTACAACTTTGGCGCTACTGGAACCAATGGCTACGTGGTTGACACGCTTTCACCTAACGGGGTTGCGGGTGATTATTCAATTGACGACTCAGGGTTTAATAACTGTATATTCTTGGGATCTTACGGCGGTGCAATTCGCCTTGCGTCAAGTGAGATTAAGATTAACGGGGGTAAGTTTAGCTTTATCGGGGTTGATGGTGTTAACCCTGTAATAAGTCTAGGTAATGGCACATCATTAATTATGAGTGGGGTTGTTTTTACTACGTGTAGCTCTGAGCATTTAGGTGCAGATGATGGAGCCAGTATTGGCAGGGTGAGCCTGACTGGGTGTTACAGTGAAACTACAACTAAGCCGCTCTACTCTCAGAGTGGGGGAACGTGTCGAAGTTTGGAGATTAACGGTGGTTATTTCTCAGCGCCGACCAACTCAGATGCAACGTTTATCTTGTTTAGTGGTAACTGCAAAGGTCAGTTGAGTATGTCTGGCGCTTCATTTCAGCGCAATGGGTATAAGTGGATTGACTTAGGTGATTCTGGGTCATACATAGGGGATGTGCAAACATCAACTACAAGCTGGTTAAGTTATTATCCAAAGGTAAAGAATGGAACATTTACGGAGCGCAAGATTGCGATTCAAACAACTCAGGATGGCGATGCAAAAAGGTTGTTAGATGTCAAATACGACAGGTCGAATAACAATAAGCTACAACTATTTGTTGGGCTTATTGATGACTTCACGAGGTTAAGATTTTTAACCTTGATGGATGCTTTGATGTATGTGGATCAATCTGGGTACACTGAGTGTGAAGTTCAAGTTCCTGCTGGTGTGCATAACATCAATAAGAGCTTTGCATTTTCTGGTGGAGTTAGCATTGTTTGCGCGGGTAGAGACAAAACAACCCTAAACATAACTAAAGATATAAACATAAGGGGCGGTAGCTTTAGAATACAATCTGCATCATTAAGCTATACAGATAGGGTAATTAAAAATAAAAACGGGCTAGTTGAGTTATTTGGCTGCAACTTTACCGCCGCGACAAATTCAATATTTTTGGTGGAGCATCATTCTGGAGTTACCAGTATTATTTCTGGAGACTTCTTAGTGGGCGGGTCTGGGGTTATTCTTGATAACGAATTAATTTCTTCTGGGGTTGTTACTTACAATGCTACGAACTTCACAAACACAAGTGCTGTAGCTTGTGCGAGTAGCACCGCGCTTTGTCGTGTTAAGGTGGTCTCGGATAGCGCGCCAGCAAATGGATTTTGGCCTAGAGGGGCAATTCAGGAGGATAGCGAGGTAAATGCGGGTGGTGTTGTTCAGAGGATTAATGTAACCGCTGGATCGTCCGGTGACTGGAAAGCGATTATTACGGCGGCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67dca10675976ef27d4414dcc2ec39566eafad38a74821a9064fc47ffbcc8503
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7286
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank